Gene Mbur_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1906 
Symbol 
ID3997698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1999369 
End bp2000613 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content50% 
IMG OID637959649 
ProductCoA enzyme activase 
Protein accessionYP_566538 
Protein GI91773846 
COG category[I] Lipid transport and metabolism 
COG ID[COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 
TIGRFAM ID[TIGR00241] CoA-substrate-specific enzyme activase, putative
[TIGR03286] putative methanogenesis marker protein 15 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.213547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA AAGGAGATCC GGTACTGGTA GCCCTTGTTT CCTGTGGAAG TGAGTATGCT 
GGGGTCCAGA GCGAGCTGGA AAAGGCCGCA AGTATGTTGA ATGCCAAGCT TGTCTATCCT
GAGATGGATG TTGCGACCCT CGATACCATC GGTATGGAGT TCGGGTTGGA AGTGGCAAGT
CCTGACCTCA GACTTATGAT GGCAAGGGCG AAAGCGGTCG TTGAAGGTGT TTCAAAAGTG
GACGGTGTGT TCGTTACATC ATGTTTCCGC TGTGCTGAAG CTGCGATCGT GAGGAATGAG
TTGAGGAGGT ATATCTTCGA GGAATCCGGT CTGCCGGTGA TAAGCTATTC TTTCACTGAG
CGTACCACTG CTGCGACACT GCTTACTCGT CTGGAAGCTC TGACAACCAT TGCGAGAAGG
AAACACCTGC TTGCGAGAAC GAAACAAAAC GGCATCACTG CAGGTATTGA TTCCGGTTCA
ACTACTACCA AAGCGGTCGT TATGAAAGAC AACGAGATCG TTGGTGAGGG CTGGGTGCCT
ACCATAAAGG TCCTTGAAAG TGCAGAGACT GCATTACAGC AGGCACTTGA TCAGTCGGGT
CTCAAAAAGG AGGATATTCA GGCGATCGGT ACTACCGGGT ACGGTCGTTT CCTGGTAGGT
GAACATTTCA AGGCAGACCT GGTGCAGGAA GAGATCACAA TGAACTCAAA AGGGGCTGTC
TATCTTGCAG ATAAACAAAA AGGACCTGCT ACTGTTATTG ATATTGGCGG AATGGACAAT
AAAGCCATTT CCGTACAGGA TGGTATTCCA GGAATGTTCA CCATGGGCGG TATCTGTGCC
GGAGCATCAG GTCGTTTCCT TGAAATGACC GCTAAACGTC TCGGTGTGGA GATCACGGAA
CTTGGGGATC TTGCTATAAA AGGCATGGGT GAGAATGTTG AAATGAACAG TTACTGTATC
GTTTTCGGTA TTCAGTCCCT GGTCAATTCG CTTGCAAAAG GTTCCTCGCC GGAAGATGTC
GCAGCGGCAG CCTGTCATAG TGTTGTCGAG CAGATATTCG AACAGCAACT GCAGGAGGTA
GAGGTAAAGG AGCCTCTTAT CCTCGTTGGA GGTTCCTCCC TTATCGCAGG TGTTCCAAAG
GCCCTTGGTG ACCTCCTGAA AATAGATGTC ATAGTGCCAC CGCATTCACA GCTTATTGGT
GCTGTGGGCG CAGCCCTTCT GGCATCAGGT TATGTTTCGG AGTGA
 
Protein sequence
MSDKGDPVLV ALVSCGSEYA GVQSELEKAA SMLNAKLVYP EMDVATLDTI GMEFGLEVAS 
PDLRLMMARA KAVVEGVSKV DGVFVTSCFR CAEAAIVRNE LRRYIFEESG LPVISYSFTE
RTTAATLLTR LEALTTIARR KHLLARTKQN GITAGIDSGS TTTKAVVMKD NEIVGEGWVP
TIKVLESAET ALQQALDQSG LKKEDIQAIG TTGYGRFLVG EHFKADLVQE EITMNSKGAV
YLADKQKGPA TVIDIGGMDN KAISVQDGIP GMFTMGGICA GASGRFLEMT AKRLGVEITE
LGDLAIKGMG ENVEMNSYCI VFGIQSLVNS LAKGSSPEDV AAAACHSVVE QIFEQQLQEV
EVKEPLILVG GSSLIAGVPK ALGDLLKIDV IVPPHSQLIG AVGAALLASG YVSE