Gene Mbur_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1870 
Symbol 
ID3997531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1968052 
End bp1968594 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content48% 
IMG OID637959614 
Productpyruvoyl-dependent arginine decarboxylase 
Protein accessionYP_566503 
Protein GI91773811 
COG category[S] Function unknown 
COG ID[COG1945] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00286] arginine decarboxylase, pyruvoyl-dependent 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCCGA AAAAAGCATT CGTGGTAAAA GGCACAGGCG TGCACAAGGA TAAACTGGCA 
TCTTTCGAGC TTGCGTTAAG GGATGCGGGT ATCGAAAAAT TCAACCTTGT GACCGTTTCA
AGCATACTAC CTCCGAACTG TTCTATTGTT TCAAGGAAAG AGGGCCTTGA AGAACTTGCT
CCCGGGCAGA TAGTATATTG TGTCATGGCA AAGAACCAGA CCAATGAGCC GGAACGGATG
ATCGCAGCAG CTATTGGGAA TGCAGTGCCT GTTGATAGTA ATGATTATGG CTATATCTCC
GAACATCATT CTTTTGGGGA GGATGAACGG ACTGCGGGGA TCTATGCGGA AGACCTTGCA
GCTACAATGC TCGCTACCAC GCTTGGCATC GAGTTCGATG CTGATTCTGC GTGGGGGGAA
AGGGAACGGG TGTATAAGGC GAGTGGTCAT ATATTCGATA CTGTTCACTA TTGCCGCTGT
GTAAAAGGGG ATGAAAACGG GCTGTGGACA ACGGTCGTTG TTTCTATGGT ATTCGTTCTT
TGA
 
Protein sequence
MIPKKAFVVK GTGVHKDKLA SFELALRDAG IEKFNLVTVS SILPPNCSIV SRKEGLEELA 
PGQIVYCVMA KNQTNEPERM IAAAIGNAVP VDSNDYGYIS EHHSFGEDER TAGIYAEDLA
ATMLATTLGI EFDADSAWGE RERVYKASGH IFDTVHYCRC VKGDENGLWT TVVVSMVFVL