| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1856 |
|---|
| Symbol | |
|---|
| ID | 3997517 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 1953320 |
|---|
| End bp | 1955122 |
|---|
| Gene Length | 1803 bp |
|---|
| Protein Length | 600 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637959600 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_566489 |
|---|
| Protein GI | 91773797 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01451] conserved repeat domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCACA TAAAAAGCCT AATGCATTTG AACCGTGCTG TCCTCACAGT TATTATAGTA
TTTTTTTTAA TGTGCACGAC AGTTTCTGCC TTTGAATTTC AATATGAAGA GATATGGGTA
CATCAGGGAG TCTTTGAACT TTCAGATGAT GACAAAGCTT CTGCTGGAAA GTACACTGTG
AAATTGCATG AGATACGACC AGAAGATAGT GAATATTCCG CAACGGTTCT CTTTTATGTT
GACGGGGAAT TCAAAGAGAC TTTCTTTGCA GATGCTGACT TGAACAATGA GTTCCTCTAT
GACGAAAACC TCAAGGTCAG AACACTAGCA ATAAACGAGA CCATGATAGC CCTTGAGATG
TACATTCATG AATACGAGCT TGTATGGATA CCTGAAAGAA TAATTAATAT AGGTGTTGGA
GAAAGCTATG AAATGAATGG GATCAATATC AAAGCTGTTG AAATTAACGA TGATGTTGCA
TCCATAGAGG TCACAAAGGA TGAACAAAGC CATAGTGACG AGTATATTAC AGGTAACCAC
CATCGCTACT TCGAGGAAGT TCTTATTCGA TTGACCTACA TTGATAAGAT AGGACAGACT
ATCACAATAC TACCATACCA GCCTGGTAAG CCAGCACTTA ACCTTGAGAT ACAGGATCTT
GACATGACAT ATTTTCCAAA TGAAGAACCT GTCTTTAACA TTCTTGTAAA AAATGAGGGA
ACCATACCAG CCAGAGGGAT GACGGTCACA TCTTCTGCAA CCAATGCACA GATCGAAACT
GATAGCTTTG AGATCCCAAT ATTAGACACT TCAAATTACC AGATTACCCC CGTAATTCTT
ACGATCCCGG AGACTCCGAC TGGAACAGAT GTAGAGATCA GTGTTCTAGT TGAAGGCTAT
GACTACAAAG GGAACAACTA CCAGACATCA ACAAACGCAG TTACCTTTGT CGAACCGTAT
ATCGCGATCT CAAAAACATA TGATGACAGC CAGTTGCAAG AAGAGATAGA TGTACCTGAG
ATATTTTTCA CCCTACTGAT ATTCAACAAT GCAAGCATTG GACATGAAGT AACTGTGAAT
GATCCAATAC CTCCCTCATT CCTGCCCGTA GACATAGCTT CTACCCAATG GAATTTCTTT
ATCGGTTCCG GAAAGTCAAA AACGATAACA TACAGTGTTA TACCCACGGC TCCTGGTAAT
TTTGAGATAT TACCGGCATT TGCAAACTGG TATTCACAGG GAGAGACTTA TAGCGTCAAT
TCAGAAGAGA GTGGTGAAAT CACTGTTAAC GGTACAATGC TTGAAGTTGA GAAGGATGTT
AGTTTAACTG ATATCTATAC AGGAGAAGAA GTAGATATCA CCATAAATAT ACGTAATGTT
GGCACCAGGG ATGCAACCGT ATCCTTTACA GAGAACATAC CTACAGGATT TGAATTTGTC
AGTGGGCAAA GAAGCTGGGA AGGACATATT GGTGTAGGGG AAGAAGAACA GATCGTCTAT
ACGATGTTTG CAAAGGAAGA AGCGACCTAT GAACTGCCTG TCACTAAAGT AGCATTTGAA
GATGAAAGTG GTACAAAAGG AACATTTGAA TCAAAACCGA TGAGACTATA TGTGTATTCG
TTCGGACCAA TTGATAGCAG CAAGGATCAG GGAATTGAAT ACCAACCACT CACAATGAAA
GAGAACATAT TATTCCTTAT ATCCTCATTT ATCACAATTC TGTGTGTTCT TTCCACAATC
CCATTAATTG TATATTTATA TATTAGCAGA CAACAGTCTA ATAGAAGGAA GAGGACACAA
TGA
|
|---|
| Protein sequence | MKHIKSLMHL NRAVLTVIIV FFLMCTTVSA FEFQYEEIWV HQGVFELSDD DKASAGKYTV
KLHEIRPEDS EYSATVLFYV DGEFKETFFA DADLNNEFLY DENLKVRTLA INETMIALEM
YIHEYELVWI PERIINIGVG ESYEMNGINI KAVEINDDVA SIEVTKDEQS HSDEYITGNH
HRYFEEVLIR LTYIDKIGQT ITILPYQPGK PALNLEIQDL DMTYFPNEEP VFNILVKNEG
TIPARGMTVT SSATNAQIET DSFEIPILDT SNYQITPVIL TIPETPTGTD VEISVLVEGY
DYKGNNYQTS TNAVTFVEPY IAISKTYDDS QLQEEIDVPE IFFTLLIFNN ASIGHEVTVN
DPIPPSFLPV DIASTQWNFF IGSGKSKTIT YSVIPTAPGN FEILPAFANW YSQGETYSVN
SEESGEITVN GTMLEVEKDV SLTDIYTGEE VDITINIRNV GTRDATVSFT ENIPTGFEFV
SGQRSWEGHI GVGEEEQIVY TMFAKEEATY ELPVTKVAFE DESGTKGTFE SKPMRLYVYS
FGPIDSSKDQ GIEYQPLTMK ENILFLISSF ITILCVLSTI PLIVYLYISR QQSNRRKRTQ
|
|---|
| |