| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1807 |
|---|
| Symbol | |
|---|
| ID | 3997934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 1905564 |
|---|
| End bp | 1906043 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637959554 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_566443 |
|---|
| Protein GI | 91773751 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1439] Predicted nucleic acid-binding protein, consists of a PIN domain and a Zn-ribbon module |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 53 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATTCT ATATTACAGA TTCCGCAGTT TTCATCTATG GATATGATGG TGACACATCG
CTGTTCATCA CTGTGCCTTC CGTAAAGGAA GAAATGAAGA GCCGGGAAGC CATGATGCGA
TTCGAGATCG CTTGTGAGAC AGGTACAAGA ATCGAAACAC CTGACCCACA GGTTCGAAAA
GAGGTACTTT CGATTGCAAA AAAGACGAGG GATGTTGAAG AGCTCTCATC CACAGATATA
GACATTCTAA CGAAGGCTCT TGAATACAAG GAGACCGGAG TCCTTCTCAC GGATGACTAT
GCTGTGCAGA ACATGGCTTC AGTGCTTGGT ATTGAAGTTA AGCCCATCAA TCAGAAAAAG
ATAAAGGACG TACTTGTATG GGGAAAAAAA TGTACTGCAT GCTATCGCAA ATTCGATGAG
GGAGATGATT GCCCAGTCTG CGGTTCTCTT TTGAAAAAGG TCAGGAAAAG AAAACTATAA
|
|---|
| Protein sequence | MTFYITDSAV FIYGYDGDTS LFITVPSVKE EMKSREAMMR FEIACETGTR IETPDPQVRK
EVLSIAKKTR DVEELSSTDI DILTKALEYK ETGVLLTDDY AVQNMASVLG IEVKPINQKK
IKDVLVWGKK CTACYRKFDE GDDCPVCGSL LKKVRKRKL
|
|---|
| |