Gene Mbur_1781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1781 
Symbol 
ID3997756 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1874153 
End bp1875481 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content49% 
IMG OID637959525 
Product2-isopropylmalate synthase 
Protein accessionYP_566420 
Protein GI91773728 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTCCG TTCGCAACAT CGCAAACGCA GGGCTCACAT CAGAAGTATG TGGCCTTGCA 
AGGGTACTAA CAAAAGACCT TGATGCATGT ATAGATGCAG GCGTTGGAAT GATCCATACG
TTTGTTTCCA CATCTGACAT CCAGAGAATA CATACCATCA AAAAGAGTCG CGAAGAAGTC
GTCGAGATGT CAGTAAATGC CGTACAGTAC ATAAAGGACC ACGGCATGCG CTGCATGTTC
TCTGCAATGG ATGCAACCCG CACAGACCTT GACTATTTGA TAGAAGTATA CAGGGCAGTT
GAAGACGCAG GATGTGACAT CATCAACGTT CCCGACACAG TGGGAATAAT TGCACCCTCC
GGTATGTACC GCCTTATCAG CAAACTGGAC AAAGAGATGA ACATCCCGAT AGACACCCAC
TGTCACAATG ACTTCGGACT TGCCGTTGCA AACAGTCTCA TGGCAATAGA AGCCGGTGCA
AGTCAGGCAC AGGTCACCGT CAACGGACTG GGCGAACGTG CCGGAAATGC AGATCTTGCG
GAAACAGTAA TGAGCTTGCA CTCGATCTAC GGTGCAAAGA CAAGCATCAA CACCGAGTAT
ATCGTAGAGA CCGCACGAAT GGTCGAACGT TACACGGGCG TTCAAATACC TCCTCACATG
CCTGTCGTAG GAGAGAACGC ATTCGCCCAT GAATCCGGCA TACACACCCA TGGGGTTCTT
GAAAATTCCG ATACGTTCGA ACCAGGCATC ATGACCCCTG AAATGGTCGG ACATACTCGA
AGGATCGTAC TCGGTAAACA CGCAGGAAAA CATGCCGTAC TAAGATCACT GCAATCTGCA
AACATCAACC CGACCGAAGA TCAGCTCGAT GCGATCATCA AAAAGGTGAA AATGCTTGCA
GACAAAGGCA AACGCATAAC CGATTCAGAC CTTTACACGA TAGCATTCGA TATCCTCGGA
AAACCCGAAG GAATGCCAGC TATCGACCTG AAAGAGGTCA GTGTCATGAC CGGAAACATA
ACCACATCTA CCGCAGTTGT CAAAGCACTC TTCAACGGAA AAGAATGCGT AACATCCAAC
GTAGGTATCG GTCCGGTCGA TGCAGCCCTA AAAGCAGTTG AGACCCTTAT CGGACAACAC
GCAAAAGTAA CCATACACGA CTTCAGGATA GAAGCTGTCA CCGGTGGATC CGATGCACTT
GCAGAAGTCG TTATCGGCGT GCAGAACGAT AATGGAAGGA TAGTGACCGC ACGCGCAGCA
AACGCTGACA TTGTCCTCGC ATCCGTCGAA GCTCTCGTAA CAGCTATTAA CATGCTCCTC
AAAAAATAA
 
Protein sequence
MESVRNIANA GLTSEVCGLA RVLTKDLDAC IDAGVGMIHT FVSTSDIQRI HTIKKSREEV 
VEMSVNAVQY IKDHGMRCMF SAMDATRTDL DYLIEVYRAV EDAGCDIINV PDTVGIIAPS
GMYRLISKLD KEMNIPIDTH CHNDFGLAVA NSLMAIEAGA SQAQVTVNGL GERAGNADLA
ETVMSLHSIY GAKTSINTEY IVETARMVER YTGVQIPPHM PVVGENAFAH ESGIHTHGVL
ENSDTFEPGI MTPEMVGHTR RIVLGKHAGK HAVLRSLQSA NINPTEDQLD AIIKKVKMLA
DKGKRITDSD LYTIAFDILG KPEGMPAIDL KEVSVMTGNI TTSTAVVKAL FNGKECVTSN
VGIGPVDAAL KAVETLIGQH AKVTIHDFRI EAVTGGSDAL AEVVIGVQND NGRIVTARAA
NADIVLASVE ALVTAINMLL KK