Gene Mbur_1764 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1764 
Symbol 
ID3997324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand- 
Start bp1855141 
End bp1856262 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content43% 
IMG OID637959509 
Productreplication factor A 
Protein accessionYP_566404 
Protein GI91773712 
COG category[L] Replication, recombination and repair 
COG ID[COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGAGA TAACTGAGAT CTACAATAAG CTTGGAGGCA TTATCAGCGA AGACGATTTT 
AGAAAGAGGG TCGATGAAAA AGTAGACCAA ATGAGCGGTC TTTGTGATAT GAAGACAGCA 
GCAATGCTTG TTGCTCATGA TCTTGGGGTC ACAGATACTG TAAAAGATAT CATCAAAATA 
AAAGATATAA CTGCTGAAAT AGGCAATGTG AGCTTTGTAG CAAAGGTCAC TTCTATTCTT 
GATGTACGTG AATTCAATAG GAACGATGGT ACTATTGGCA GAGTGGGAAC AGTTAAGGTC 
GCAGACGAAA CAGGTTCCAT AAAGCTCACT CTCTGGGATG AACGTGCAGA TATTATCAAG 
AATGGTAGCA TCGAAGTTGG AGATTGTCTG GAGATCACAG GCTATGCAAA GGATGGCTAT 
TCCGGAACAG AGATCAATAT CGGCAAATAC GGCCTGATGC GTGAGACCGA CCAGAAAGTG 
GAGGTCAGCA TGCAGTCGCA GAAGATAGCT GATATAAAGG ACGGCATGTC CGACATCAAT 
ATTTCAGGAA AACTTCTGGA TATCTCTGAT GTCAGGAACT TCCAGAAAAA GGATGGTAAC 
CCTGGCCGCG TCATGAACAT ACTGATAGGT GACGAAACCG GAAAGATACG CGTGACACTG 
TGGGACGAAA AAGTAGATTC CACCACTTCT CTGAACCTTG ATGATGCTGT TGAGATAATC 
AACGGATATG CAAGAACAAA TAACTTCAGC CAGCAGGTTG AGGTACAGAT CGGAAACCAT 
GGTGTTCTCA GAAAGACCGA AGCAAATGTT GAGTACAAAG AGAGCTTCAC ACCTATCGCC 
GACATCATAC CCGGTGAATC CTATTCGATA AAAGGATTTG TTTCCGGTCT TGGAGAACTG 
AGGGAGTTCG AGAAAGATGA CGGAACCAGC AATATGGTCT CAAACATCTA TGTATCTGAT 
GATACCGGCC GTATTCGAAT TGCTCTGTGG GGAGATCATG CCCTTCTTGT AGATGAACTG 
GACATTGAAA CCCCTATTGA AATAATTGAT ACATACTCAA AATCCGGATA CGAGGATATA 
GAACTAAGCG CCGGAAACCG TACAAGAATA AGCATAAAGT AA
 
Protein sequence
MDEITEIYNK LGGIISEDDF RKRVDEKVDQ MSGLCDMKTA AMLVAHDLGV TDTVKDIIKI 
KDITAEIGNV SFVAKVTSIL DVREFNRNDG TIGRVGTVKV ADETGSIKLT LWDERADIIK 
NGSIEVGDCL EITGYAKDGY SGTEINIGKY GLMRETDQKV EVSMQSQKIA DIKDGMSDIN 
ISGKLLDISD VRNFQKKDGN PGRVMNILIG DETGKIRVTL WDEKVDSTTS LNLDDAVEII 
NGYARTNNFS QQVEVQIGNH GVLRKTEANV EYKESFTPIA DIIPGESYSI KGFVSGLGEL 
REFEKDDGTS NMVSNIYVSD DTGRIRIALW GDHALLVDEL DIETPIEIID TYSKSGYEDI 
ELSAGNRTRI SIK