Gene Mbur_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1578 
Symbol 
ID3997814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1655243 
End bp1655734 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content43% 
IMG OID637959335 
Product3-isopropylmalate dehydratase, small subunit 
Protein accessionYP_566232 
Protein GI91773540 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR02087] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.0376678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAAAGTA AAATTAAAGG AAAAGCTTGG GTATTCGGCG ATGATGTCGA CACTGATGTC 
ATTATCCCTG GTAAATATCT CAGGACAACT GATATGCAGG TTTTCGCTGA TCATGCGATG
GAGGGCATAG ATCCTGATTT TTCGAAGAAG GTCCATAAAG GCGATGTGGT CGTTGGGGGA
AGCAACTTTG GTTGTGGGTC TTCAAGGGAA CAGGCAGCTC TTGCTTTAAA ATATGCAGGC
GTTTCTTGTG TTATCGCTAA ATTTTTTGGG CGTATCTTCT TCCGTAATGC TATCAATGTA
GGACTTCCTC TCATGGAAGC TGATATTGAG TGCAATGAAG GTGATACTGT TGAGGTCGAT
CTGCAGGAAG GCCTGGTGAC CATTAACGGT AAAGTATTCA AAGGCAACAA GCTTCCTGAT
TTCCTTCTTG AGATATTGAC AGATGGCGGC CTTGTTGAAC ACAGGAAGGC TATGCAGAAA
AAGGACCAAT AA
 
Protein sequence
MESKIKGKAW VFGDDVDTDV IIPGKYLRTT DMQVFADHAM EGIDPDFSKK VHKGDVVVGG 
SNFGCGSSRE QAALALKYAG VSCVIAKFFG RIFFRNAINV GLPLMEADIE CNEGDTVEVD
LQEGLVTING KVFKGNKLPD FLLEILTDGG LVEHRKAMQK KDQ