Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_1578 |
Symbol | |
ID | 3997814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | - |
Start bp | 1655243 |
End bp | 1655734 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637959335 |
Product | 3-isopropylmalate dehydratase, small subunit |
Protein accession | YP_566232 |
Protein GI | 91773540 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
TIGRFAM ID | [TIGR02087] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.0376678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAAGTA AAATTAAAGG AAAAGCTTGG GTATTCGGCG ATGATGTCGA CACTGATGTC ATTATCCCTG GTAAATATCT CAGGACAACT GATATGCAGG TTTTCGCTGA TCATGCGATG GAGGGCATAG ATCCTGATTT TTCGAAGAAG GTCCATAAAG GCGATGTGGT CGTTGGGGGA AGCAACTTTG GTTGTGGGTC TTCAAGGGAA CAGGCAGCTC TTGCTTTAAA ATATGCAGGC GTTTCTTGTG TTATCGCTAA ATTTTTTGGG CGTATCTTCT TCCGTAATGC TATCAATGTA GGACTTCCTC TCATGGAAGC TGATATTGAG TGCAATGAAG GTGATACTGT TGAGGTCGAT CTGCAGGAAG GCCTGGTGAC CATTAACGGT AAAGTATTCA AAGGCAACAA GCTTCCTGAT TTCCTTCTTG AGATATTGAC AGATGGCGGC CTTGTTGAAC ACAGGAAGGC TATGCAGAAA AAGGACCAAT AA
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Protein sequence | MESKIKGKAW VFGDDVDTDV IIPGKYLRTT DMQVFADHAM EGIDPDFSKK VHKGDVVVGG SNFGCGSSRE QAALALKYAG VSCVIAKFFG RIFFRNAINV GLPLMEADIE CNEGDTVEVD LQEGLVTING KVFKGNKLPD FLLEILTDGG LVEHRKAMQK KDQ
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