Gene Mbur_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1574 
Symbol 
ID3997810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1650000 
End bp1651649 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content43% 
IMG OID637959332 
Producttype II secretion system protein E 
Protein accessionYP_566229 
Protein GI91773537 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACCTG AGTATCAGAA AGCATTACAA AGAAATCCTC ATCTTGGGGT ATATATCAAA 
AACTTTGTAA ATAGAACAGG ACATCAACCG GAATTTGTTG CTGGCCTCTC AAAGGACCTG
CAAGATGAGG ACTATGTCAA CGTGATCTTT CCCGTTGGGG ATCCGGTCTT TATTCATATT
TATGGAACTC CGGAAATGGG AGAGATAGGA TACTATTCGA TTGAACCATT ACTTAACGAT
CTTGAAAAAA AGAAATATGC CGCAATAATG GACCTAATTC TTGAAAGATC CGCAAACGAA
CCGATCCCGA AGGATGAAGA TGAACTTAAA GACCTTATTA TTAAACTATT GGGAAGTGCA
ATAGATGTTG GTGCCGGCGG TCAGATCGAT GAAGAAAAAG TGGGCCTCAT CGAAAAAATA
CTGCCAAAAA CAAAAACCAT ACCTGTGACA CAACAGGAAC TTAACCATCT CCAGTATCAC
ATCGAAAGGA ACATTATCGG ATCAGGACCA ATTGAACCTA TAATCAGAGA TCCATATCTT
GAAGATATTC ATAGCATTGG AGTGGTCGGT ATTTTTATCG TACATAAGAT ATTTGGAATG
ATGAAGACAG ACCTTTCCTT CGGAGACGAG GCCGGCCTTG ACCAATGGCT CAGGAGTATG
AGCGAAAGGA TAGGAAGACC TGTCAGTGAT GCGAAACCAA TTGCTGATGG TGCACTGCCT
GATGGTTCCC GTATCAACAT CATTTACAGT CTTGATGTAA GTAAGCGTGG TAGCAGTTTT
ACCATGCGTA AGTTCAGTGA AGTTCCTGTA AGTATAATAG AACTTATCAT GTGGGGAGCA
CTCAGTTCTG AAATGGCCGC TTACATGTGG ATGTGTCTTG AGAATGGAAT GAGCATATTC
TTTAGTGGTG AGACCGCTAG TGGAAAGACT ACCATGCTGA ATGCTTGTCT TCCTTTCGTC
AACCCTACCG CCAAAATATT CACAGCAGAA GATACAGCTG AGGTCCAGCC TCCTCACCCG
GTATGGCAGC AGTTGATAAC ACGTGAGGAT GGACCACCCG AATCGAGAGT TGACACTTTT
GCGCTTCTAA AAGCGGCTCT AAGGTCCAGA CCGAACTATA TTATCGTTGG TGAAATTCGT
GGTGCAGAAG GAGCAGTAGC TTTTCAGGGT ATGCAGACAG GTCACCCGGT ATTGGCTACC
TTCCACGCAT CTGCAGTAAC AAAGATGATA CAGCGTCTGA CAGGTGACCC CATAAACGTT
CCTGTCACCT TCATCGACAA CCTCAATGTT GCGATGATAT TGTCCGCTGT ATATCGTAAA
GGAAAATTCC TCAGACGTTG TCTTGCAGTT GAAGAAATAG AAGGATACTA CGAAGATGCT
GGCGGAGTGG TCACAAGAGC TGTATTCCAG TGGGATCCGG AAACCGACAC CCATAGCTTT
AGAGGATTGA ACAACAGTTA CATTCTTGAG AACAAGATCG CCACACAACT CGGATATGAA
GATAAAAGGG ATATTTACAA GGACCTGATG TTAAGGGCAA GGATACTGGA CGAGATGAAA
GAGAGAGGCA TCAAGGATTA TTACGATGTG CTCGAGATAA TTGTGAACTT CTATAAACAT
GGTATTGATG GATTACCATT TGCAGTATGA
 
Protein sequence
MEPEYQKALQ RNPHLGVYIK NFVNRTGHQP EFVAGLSKDL QDEDYVNVIF PVGDPVFIHI 
YGTPEMGEIG YYSIEPLLND LEKKKYAAIM DLILERSANE PIPKDEDELK DLIIKLLGSA
IDVGAGGQID EEKVGLIEKI LPKTKTIPVT QQELNHLQYH IERNIIGSGP IEPIIRDPYL
EDIHSIGVVG IFIVHKIFGM MKTDLSFGDE AGLDQWLRSM SERIGRPVSD AKPIADGALP
DGSRINIIYS LDVSKRGSSF TMRKFSEVPV SIIELIMWGA LSSEMAAYMW MCLENGMSIF
FSGETASGKT TMLNACLPFV NPTAKIFTAE DTAEVQPPHP VWQQLITRED GPPESRVDTF
ALLKAALRSR PNYIIVGEIR GAEGAVAFQG MQTGHPVLAT FHASAVTKMI QRLTGDPINV
PVTFIDNLNV AMILSAVYRK GKFLRRCLAV EEIEGYYEDA GGVVTRAVFQ WDPETDTHSF
RGLNNSYILE NKIATQLGYE DKRDIYKDLM LRARILDEMK ERGIKDYYDV LEIIVNFYKH
GIDGLPFAV