Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_1574 |
Symbol | |
ID | 3997810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | + |
Start bp | 1650000 |
End bp | 1651649 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637959332 |
Product | type II secretion system protein E |
Protein accession | YP_566229 |
Protein GI | 91773537 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAACCTG AGTATCAGAA AGCATTACAA AGAAATCCTC ATCTTGGGGT ATATATCAAA AACTTTGTAA ATAGAACAGG ACATCAACCG GAATTTGTTG CTGGCCTCTC AAAGGACCTG CAAGATGAGG ACTATGTCAA CGTGATCTTT CCCGTTGGGG ATCCGGTCTT TATTCATATT TATGGAACTC CGGAAATGGG AGAGATAGGA TACTATTCGA TTGAACCATT ACTTAACGAT CTTGAAAAAA AGAAATATGC CGCAATAATG GACCTAATTC TTGAAAGATC CGCAAACGAA CCGATCCCGA AGGATGAAGA TGAACTTAAA GACCTTATTA TTAAACTATT GGGAAGTGCA ATAGATGTTG GTGCCGGCGG TCAGATCGAT GAAGAAAAAG TGGGCCTCAT CGAAAAAATA CTGCCAAAAA CAAAAACCAT ACCTGTGACA CAACAGGAAC TTAACCATCT CCAGTATCAC ATCGAAAGGA ACATTATCGG ATCAGGACCA ATTGAACCTA TAATCAGAGA TCCATATCTT GAAGATATTC ATAGCATTGG AGTGGTCGGT ATTTTTATCG TACATAAGAT ATTTGGAATG ATGAAGACAG ACCTTTCCTT CGGAGACGAG GCCGGCCTTG ACCAATGGCT CAGGAGTATG AGCGAAAGGA TAGGAAGACC TGTCAGTGAT GCGAAACCAA TTGCTGATGG TGCACTGCCT GATGGTTCCC GTATCAACAT CATTTACAGT CTTGATGTAA GTAAGCGTGG TAGCAGTTTT ACCATGCGTA AGTTCAGTGA AGTTCCTGTA AGTATAATAG AACTTATCAT GTGGGGAGCA CTCAGTTCTG AAATGGCCGC TTACATGTGG ATGTGTCTTG AGAATGGAAT GAGCATATTC TTTAGTGGTG AGACCGCTAG TGGAAAGACT ACCATGCTGA ATGCTTGTCT TCCTTTCGTC AACCCTACCG CCAAAATATT CACAGCAGAA GATACAGCTG AGGTCCAGCC TCCTCACCCG GTATGGCAGC AGTTGATAAC ACGTGAGGAT GGACCACCCG AATCGAGAGT TGACACTTTT GCGCTTCTAA AAGCGGCTCT AAGGTCCAGA CCGAACTATA TTATCGTTGG TGAAATTCGT GGTGCAGAAG GAGCAGTAGC TTTTCAGGGT ATGCAGACAG GTCACCCGGT ATTGGCTACC TTCCACGCAT CTGCAGTAAC AAAGATGATA CAGCGTCTGA CAGGTGACCC CATAAACGTT CCTGTCACCT TCATCGACAA CCTCAATGTT GCGATGATAT TGTCCGCTGT ATATCGTAAA GGAAAATTCC TCAGACGTTG TCTTGCAGTT GAAGAAATAG AAGGATACTA CGAAGATGCT GGCGGAGTGG TCACAAGAGC TGTATTCCAG TGGGATCCGG AAACCGACAC CCATAGCTTT AGAGGATTGA ACAACAGTTA CATTCTTGAG AACAAGATCG CCACACAACT CGGATATGAA GATAAAAGGG ATATTTACAA GGACCTGATG TTAAGGGCAA GGATACTGGA CGAGATGAAA GAGAGAGGCA TCAAGGATTA TTACGATGTG CTCGAGATAA TTGTGAACTT CTATAAACAT GGTATTGATG GATTACCATT TGCAGTATGA
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Protein sequence | MEPEYQKALQ RNPHLGVYIK NFVNRTGHQP EFVAGLSKDL QDEDYVNVIF PVGDPVFIHI YGTPEMGEIG YYSIEPLLND LEKKKYAAIM DLILERSANE PIPKDEDELK DLIIKLLGSA IDVGAGGQID EEKVGLIEKI LPKTKTIPVT QQELNHLQYH IERNIIGSGP IEPIIRDPYL EDIHSIGVVG IFIVHKIFGM MKTDLSFGDE AGLDQWLRSM SERIGRPVSD AKPIADGALP DGSRINIIYS LDVSKRGSSF TMRKFSEVPV SIIELIMWGA LSSEMAAYMW MCLENGMSIF FSGETASGKT TMLNACLPFV NPTAKIFTAE DTAEVQPPHP VWQQLITRED GPPESRVDTF ALLKAALRSR PNYIIVGEIR GAEGAVAFQG MQTGHPVLAT FHASAVTKMI QRLTGDPINV PVTFIDNLNV AMILSAVYRK GKFLRRCLAV EEIEGYYEDA GGVVTRAVFQ WDPETDTHSF RGLNNSYILE NKIATQLGYE DKRDIYKDLM LRARILDEMK ERGIKDYYDV LEIIVNFYKH GIDGLPFAV
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