| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1562 |
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| Symbol | |
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| ID | 3997798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | - |
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| Start bp | 1639314 |
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| End bp | 1640378 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637959320 |
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| Product | rRNA biogenesis protein Nop56/Nop58 |
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| Protein accession | YP_566217 |
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| Protein GI | 91773525 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.001188 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTCCTTAC TAAAGCGAAC AATTCCGGTG CAATGGTATG GAAGGATTGA TTTGAAGATC
ATTACTTGGT ATGGTATACT GACCATCGGT GACGATGGTG TTAGTGAATG TGAACCTTTC
AACAAAGATG TTGATGAGCT TGCGGAACTT CTGCTCCGGA AGGACGTTGT CGCATATTCT
CCCGGCAGTG GTTTCGATAT ACGTACAGTG GCCATTGAAT GCGGGTTCGT GGAAAACGAT
GAGGAATACA ATTCTCTGTT AAGGGATGTG TCTATTCGTG CTGCGAAGTT ACAGATATCG
AGGACGAATA CTCCGGATAT GCAAATAATT CAGGCGGTAG AGGCGCTGGA TGATATCGAT
GATGTTGTCA ACGTGCTTTC CGAACGTCTG TCCGAATGGT ATGGTCTGCA TTTTCCGGAA
TTGGGTCTAA GTTCTGAACC GCTTGCACGT TTCGTTAGCG AGTTCGGTTC ACGCAACAAC
GTTCCTGCCG AACATCCTAT GTTCGAAAAG GCAACCTCTT CCATGGGTTC TGAACTCCCT
TCTGCTGATG AGGAACTTAT AAAGGGCTTT GCTTCCAATG CTTGTGAACT TTATGACAGT
CGGCACAGCA TTGAAGCGAG TATAGTCAGG AATATGGAAA AAATGGCACC GAACGTTACA
TTGATCACAG GGTCTCTCAT CGGTGCCCGT TTTATTAGTA TGACAGGTGG CCTCGCAAGG
CTTTCTCAAT TGCCATCGAG CACAGTTCAG GTCATGGGTG CCAATAGGGC ACTTTTTAAA
CATCTTCGTG GGCGAGCACC GTCCCCAAAG CACGGTATAA TATTCAATAA TCCTCTGGTC
AAGAACTCTC CCTGGTGGCA GAGGGGTAAG ATCGCACGTG CGCTGGCTGC AAAGATAAGT
CTGGCAGCAC GCATGGATGT TTATTCCGGT GAATTGCATC CTGAGATAAA GGTCGACCTT
GAAAAGAAGG TAAATTCTAT AAAAGCTGCC AATCCAAAGC CTCCCGTTAA ACAAAAACCC
GCTGGTAAAG GATACAAGGG TAAAAATAAA GGAGGCGAGA GATAA
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| Protein sequence | MSLLKRTIPV QWYGRIDLKI ITWYGILTIG DDGVSECEPF NKDVDELAEL LLRKDVVAYS
PGSGFDIRTV AIECGFVEND EEYNSLLRDV SIRAAKLQIS RTNTPDMQII QAVEALDDID
DVVNVLSERL SEWYGLHFPE LGLSSEPLAR FVSEFGSRNN VPAEHPMFEK ATSSMGSELP
SADEELIKGF ASNACELYDS RHSIEASIVR NMEKMAPNVT LITGSLIGAR FISMTGGLAR
LSQLPSSTVQ VMGANRALFK HLRGRAPSPK HGIIFNNPLV KNSPWWQRGK IARALAAKIS
LAARMDVYSG ELHPEIKVDL EKKVNSIKAA NPKPPVKQKP AGKGYKGKNK GGER
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