Gene Mbur_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1543 
Symbol 
ID3997367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1619949 
End bp1620827 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content48% 
IMG OID637959301 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_566199 
Protein GI91773507 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01121] D-amino acid aminotransferase
[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAT TACTGATCTA CTACAACGGC GAGTTTGTCC CTAAGGGCAA AGCAACAGTT 
TCCATTTATG ACCACGGTTT CCTTTATGGA GACGGTGTTT TTGAAGGTAT CAGGGCATAC
AACGGGCGTG TCTTCAAGCT CGATGAGCAC GTTGACAGGC TCTATGATTC AGCAAAGGCA
ATTGCTCTTG AAGTTCCCCT CACAAAGGCT GAGATGACAG AGGCCATCCT TGAGACATTG
AGGAAGAACA ATCTCACTGA TGCGTACATC CGCCCTATAG TTACACGTGG TATTGGTGAC
CTTGGTCTTG ACCCACGCAA GTGCCCAATT CCAAGCATCT ACATCATTTC ACAGGAATGG
GGTGCAATGT ATGGCGACCT CTATGAAGTC GGACTTAAAG CTATCACAGT CGGTATCAGG
CGTAATGCCC CTGATGCACT GTCCCCTAAC ATCAAATCAT TGAACTATTT GAACAACATC
CTTGCCAAGA TCGAAGCAAA TGCAAAGGGT GGGGATGAGG CTATCTTCCT TGACCAGAAC
GGTTTCGTTT CCGAAGGTTC CGGTGACAAC ATCTTTGTTA TCAAGAACGG CAAGATCTAC
ACCCCTCCGA CCATCAACAA TCTGAAAGGT ATCACAAGGG CAACTGCAAT CGAACTTCTT
GAAGAGCGCG GATATGAGGT AGTTGTTCAG AACCTCGGTC TCTTCGATAT GTACACTGCA
GACGAGATCT TCGTTACAGG TACAGCAGCA GAGGCGGCAC CTATCACATT GCTTGACGGT
CGCAAGATCG GTGATGGTTC AGTCGGTCCT ATCACAAAAG CTGCAGTTGC TGCGTTCGAG
GAAGTTACTG GCACCATCGG TACACCTATC TTTGAGTGA
 
Protein sequence
MSELLIYYNG EFVPKGKATV SIYDHGFLYG DGVFEGIRAY NGRVFKLDEH VDRLYDSAKA 
IALEVPLTKA EMTEAILETL RKNNLTDAYI RPIVTRGIGD LGLDPRKCPI PSIYIISQEW
GAMYGDLYEV GLKAITVGIR RNAPDALSPN IKSLNYLNNI LAKIEANAKG GDEAIFLDQN
GFVSEGSGDN IFVIKNGKIY TPPTINNLKG ITRATAIELL EERGYEVVVQ NLGLFDMYTA
DEIFVTGTAA EAAPITLLDG RKIGDGSVGP ITKAAVAAFE EVTGTIGTPI FE