Gene Mbur_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1496 
Symbol 
ID3998394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand- 
Start bp1572374 
End bp1572994 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content44% 
IMG OID637959253 
Producttranscription factor 
Protein accessionYP_566153 
Protein GI91773461 
COG category[K] Transcription 
COG ID[COG2101] TATA-box binding protein (TBP), component of TFIID and TFIIIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.000221739 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGAAT CTAATATCAA AATAGAAAAT GTGGTCGCAT CAACTGAACT TGCAGAAGAG 
TCCAAGAACA TGTCGGAATA TAATATCAAA ATAGAAAACG TGGTCGCATC AACTAAACTT 
GCTGAAGAGT TCGACCTTAT AAAGATTGAA GCGGAATTCG AGGGTGCAGA ATACAACAAG 
CAGAAATTCC CCGGGCTTGT CTATCGTGTT ACTGACCCAA AGGCTGCATT CCTTGTATTC 
ACATCCGGTA AGGTCGTATG TACCGGTGCT AAGAACGTTG CTGATGTACA CATCGTAATT 
GGTAATATGG CAAAGAAGCT CAACGGTATC GGCATAGAGA CCATTGCAGA CCCTGAGATC 
ACTGTACAGA ATATTGTTGC TTCAGCTGAC CTTCATGCTA CCCTCAATCT CAACGCAATT 
GCTATAGGAC TCGGTCTCGA GAATATCGAG TATGAGCCTG AGCAGTTTCC CGGACTCGTT 
TACAGGATAG CTGATCCAAA AGTTGTAGTA CTTATTTTCA GCTCAGGCAA ACTTGTGGTC 
ACAGGCGGAA AATCACCTGC GCACTGTGAT CAAGGAGTTG AAGTTGTAAG GCAGCAGCTT 
GACAACATGG GACTTCTGTA A
 
Protein sequence
MSESNIKIEN VVASTELAEE SKNMSEYNIK IENVVASTKL AEEFDLIKIE AEFEGAEYNK 
QKFPGLVYRV TDPKAAFLVF TSGKVVCTGA KNVADVHIVI GNMAKKLNGI GIETIADPEI 
TVQNIVASAD LHATLNLNAI AIGLGLENIE YEPEQFPGLV YRIADPKVVV LIFSSGKLVV 
TGGKSPAHCD QGVEVVRQQL DNMGLL