Gene Mbur_1396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1396 
Symbol 
ID3997085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1485259 
End bp1486056 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content44% 
IMG OID637959159 
Producttranslation initiation factor IF-2 subunit alpha 
Protein accessionYP_566061 
Protein GI91773369 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1093] Translation initiation factor 2, alpha subunit (eIF-2alpha) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0200343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAATA ATAATTGGCC AGAAAGCGGC GACTTTGTAG TTTGTACTGT AAAGAACGTA 
GTCGACTTTG GGGCCTACAC CACTCTTGAA GAATATGGAG GCAAAGAAGG ATTCATCCAT
ATTTCCGAGG TCAAGGCCGG CTGGGTAAAA TATGTTCGTG ATTACGTAAG GGAAGGACAG
AAGATCGTCT GCAAAGTGCT GAACGTAGAT CCAAACCGAC GTCACATCGA TCTTTCATTG
AAAGATGTGA ACGAGCACCA GAAGCGTGCA AAAATACAGG ACTGGAAGAA CGAGCAGAAA
GCTACAAAAT GGCTTCAGTT CGTAGCAGAG GACATGGGCA CCAGTCCGGA AGAGATGGGA
GCTGTAACAG CTACACTGTC TAATGAGTTC GGAAGTTGCT ACATAGCTTT TGAAGAAGCA
GCCATTAATG GCGAAGATGC TTTCGAAGAC ATTGTTATTA GCAAGGAACT TGCTGAAAAG
ATAGCCAGTA TCGCTCAAGA GAACATTAAA CTTCCATTCG TAGATATCGC AGGATATGTG
GACCTTACAA GCAATCTTCC TGACGGGATC GAGCTAATAA AGAAAGCATT GAAAGCAGCA
GCAAAGGTCA AAATAGACGA TGTAAGAATA GATGTCACTT ACACCGGTGC ACCAAGATAT
AGGATCAAGG TAATCGCACC AGAGTACAAG ACCGCTGAAG CTGCTTTGAA GAAAGCTTCT
GAAAAAGCTA TCGAGACAAT TGAGAAGAAG GGCGGAAAAG GTATTTTCCA CAGACATATA
GAAACAGCAA AGGCGTGA
 
Protein sequence
MDNNNWPESG DFVVCTVKNV VDFGAYTTLE EYGGKEGFIH ISEVKAGWVK YVRDYVREGQ 
KIVCKVLNVD PNRRHIDLSL KDVNEHQKRA KIQDWKNEQK ATKWLQFVAE DMGTSPEEMG
AVTATLSNEF GSCYIAFEEA AINGEDAFED IVISKELAEK IASIAQENIK LPFVDIAGYV
DLTSNLPDGI ELIKKALKAA AKVKIDDVRI DVTYTGAPRY RIKVIAPEYK TAEAALKKAS
EKAIETIEKK GGKGIFHRHI ETAKA