| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1383 |
|---|
| Symbol | |
|---|
| ID | 3997072 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 1472683 |
|---|
| End bp | 1473612 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637959146 |
|---|
| Product | NADH--ubiquinone oxidoreductase subunit RnfD |
|---|
| Protein accession | YP_566048 |
|---|
| Protein GI | 91773356 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00000000532303 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTTA CGATTTCAGC TCCACCTCAT AAGAAAGAGA ATATCACTTT TAAGAAGATA
ATGTGGGCAA AGGTCCTTGC TCTTATGCCT GTAGTCCTTT TGTCCGTATA TTTGTTCGGT
CTTCCTGCCA TAGGGCTGGT GGCTGCAAGT ATCTTTGCAG CGATAGCGAC CGAAGCAACT
ATACAGAAAG CATTTGGCCA GAAGATAACT ATCGCCGACG GACATGCAGT GTTGATCGGT
CTGATGGTAG CTATGATTAT TCCACCAGAA GTTCCCCTCT GGATCCCTAT GATAGGAACT
GTTTTTGCTG TTGGTATTGG AAAGCATGCT TTCGGAGGCA TTGGTTCCTA CGTTTTCAAT
CCAGTCCTCG CTGCATGGCT TTTCCTGTCG TTGGCATGGG GTTCTATAAT GGCTCCTGCA
TCCTATCCTC AGACAAGTGC CTTATTTGAA CTGGTTCTTG AGAACGGAGC AGGGGTAATG
GCTGGAGTGT CGCCTTTTTT CATTTTACTT GCAGGTGCAG TCCTTATATT CCGCAGGTAC
ATCGAATGGA GAATTCCTGT GACTTTCTTT GTGACAACGG TACTGCTGGC ATTTTTACTG
GGTGATAGTC TGTCCTATGT TGTTCTTGGG GTTGTAGTGT TTGGTGTTCT TTTCATAGCG
ACCGATACTT CAACTTCACC CACGACAAAG AACGGTCGTG TGATTTATGG TATTGTTTGT
GGGGTTCTTG TAGTTGTATA TGGACACTTT GCAAATTACG TAGATGGGAC TTTCTATGGT
CTGTTCCTTG CAAACTGTGT TGCTTCACTG ATCGATAACA ATACCCTTCC GGCATCATAT
GGTACCGAGA CATTCTTACA ATGTAAGTAC AGGAGCATTG TTTCAAAGAT ACCTTTCAAA
GACCGTCTGG AGGTGTTCTT AGATGACTGA
|
|---|
| Protein sequence | MTFTISAPPH KKENITFKKI MWAKVLALMP VVLLSVYLFG LPAIGLVAAS IFAAIATEAT
IQKAFGQKIT IADGHAVLIG LMVAMIIPPE VPLWIPMIGT VFAVGIGKHA FGGIGSYVFN
PVLAAWLFLS LAWGSIMAPA SYPQTSALFE LVLENGAGVM AGVSPFFILL AGAVLIFRRY
IEWRIPVTFF VTTVLLAFLL GDSLSYVVLG VVVFGVLFIA TDTSTSPTTK NGRVIYGIVC
GVLVVVYGHF ANYVDGTFYG LFLANCVASL IDNNTLPASY GTETFLQCKY RSIVSKIPFK
DRLEVFLDD
|
|---|
| |