Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_1334 |
Symbol | |
ID | 3997550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | - |
Start bp | 1420057 |
End bp | 1422159 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637959100 |
Product | DNA mismatch repair protein MutS-like protein |
Protein accession | YP_566002 |
Protein GI | 91773310 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1193] Mismatch repair ATPase (MutS family) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000127118 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGGGT TACAGGATAT TCCGCGTATT GGTGAGAAAA TGGCGAAACG CTTTCAGGAG CATTTTGGTG GGGAGGATAG GGCAATGGAT GCTATTTTAA GCGGTGATAT CGCAAGTATT TCCGAAGTTG AAGGAGTAGG GCAAAGATAT GCTATTTCTC TTGTACACGA AGTGCGTGCA CAGTTCGAAG GTGTTAGTAT GGAAGATTTC CTTAAGACAA AGGAAGCTTC GGATATCTAT GAGAGGCTTC TGGATATCAT CAAGCAGTTC ACACATACAA GATATGCAAA GGACAAGCTT CATGTCTACA TACCTTATCC TGCAAGCAAA AAGGCACTCA TCGAGGATAT TAGGAAGGAT GTTGCCGGGT ATATGAGGAC TGCTTGCGTA TTGGGTGACA ATGAAGAACT TATCACGCTT CTATCCAATG TAAAGGCTCT GGATGTCAAA TGCAACCCGC CGAAAGTTAG GTCCAGGGCA ATTCTGACTG CCGATAGCAA GCAGTATGAA GTTGCACGGC AGATGTTCGG GGATCTTCTG GATGTCCAGT TCGTGAAGGG TGCGGGGGAG TTCGTTGATA CTGCAAGAGG GTATTCCCAT GTTGTTGCTG CTGATGACAA GTGCATGGCC TTTGACCTTC CTGAAGATGT TGATCCTGAG TTCATTCCTG ATATTCGCAA AGCAAATATG TGGCAGATAG TGCCGGAGAA GGAGATCTAC TTCTTTGCGA GGAATCTTAA TACGCTTGAA TGCTGTATCC AAATGGTTGA GATATTACGC TGTTCAGGTA TATGTTCCCT TGAAGATATT GCGGACGATG ATATTGAAAG ATTAAAGCAG ACTCTTTCTC TTATAGATGG GGATGGGGAT GTCAGGGAGG GTTCTGATAA TCGTATCGAT CGTCTTATGA TGATCTCCAG AAATGTCGAT AATTGTGTTT CAGAAACCAT TACTGCTGCC AATGTCACTC TTAATTCCTG TCTGGAAGAG AGCAAACTTA CGCTTAGTGG TCAGGACATG CTTAAGGTAA TGAACGGGAA AATGGAGATA AAGGACCTGC TCGAAAAAGA GCTGTTCCAT TCTTACAGTT CTGTTATCAA GACCGCAAAA GAAAAGATCG TGGCGGACCT TGCGCTTGAA AGGAATGAGC TGTTGTCCCT TGATTCCTTT TTCTCGGATG AGATCACCTA TCCTCTTGAA GTGAAACAGG AATGCCTGTA TTCTTTTAAG CAGCAGATCG TAAATCAAGT GGAAAAACTG AAGGTTCGGC ACAAATGCAA TATTGCGAGG ACACTCTCGG AGTTCCATGA TGTTGCTCAG AGGATGGTTC ATGAAGCCCT TGATTTCGAT GTGGGCTTTT CAATAGGTTG CTTTGCAAAG GAGTTCGACC TTCATCTTCC TGATTTCATT GAAGGGACTG GTATTGCGTT CGAGTCGGCA TCGAACCTTT TCATAAGAAC TCGGCATGGT TCGGTCGTAC CTATTGATTA TTCGGTAGGC AATACCTCCT ATGATCCTGA TGGGAATGGC AGTCGAGTTG TCCTTTTGAG TGGTGTCAAT TCAGGAGGAA AGACCTCTCT GCTTGAATTG GTGGCACAGT GCGTTATTCT TGCCCACATG GGCTTCCCAA CTCCTGCGGT GAACATGGAG ATAGGTCTTG CGGAAGAGTT CTATCATTTC GGAAAATCCA AAGGTACCCT GGACGCCGGA GCTTTCGAGA CCACACTTGT TGATTTTTCA GTTGTTGCAA ACGATTCTCC AAAGCTTGTT CTGGCAGATG AACTGGAATC CATTACTGAG CCGGGAGCTT CTGCAAAGAT AATTTCGGGA ATACTGGAGG TGCTTTCTGA GAATGATAAT GGCATGTCGA TTTTCGTGTC ACATTTATCA GAACTTATCC TTGAGAACAC TGAATGCAAT GTACGAGTTG ACGGTATCGA AGCAAGCGGG CTTGATAAGG ACCTGAACCT CATAGTTGAA AGGACGCCAA GGTATAATTA TGTTGCAAAG AGCACTCCCG AGCTCATAGT CGAGCGTTTG TCAAGAAAGT CAAATGGTCT GGAGCAGGAC TTCTATAAAA GATTGCAAAA AAAGTTCAAG TAA
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Protein sequence | MNGLQDIPRI GEKMAKRFQE HFGGEDRAMD AILSGDIASI SEVEGVGQRY AISLVHEVRA QFEGVSMEDF LKTKEASDIY ERLLDIIKQF THTRYAKDKL HVYIPYPASK KALIEDIRKD VAGYMRTACV LGDNEELITL LSNVKALDVK CNPPKVRSRA ILTADSKQYE VARQMFGDLL DVQFVKGAGE FVDTARGYSH VVAADDKCMA FDLPEDVDPE FIPDIRKANM WQIVPEKEIY FFARNLNTLE CCIQMVEILR CSGICSLEDI ADDDIERLKQ TLSLIDGDGD VREGSDNRID RLMMISRNVD NCVSETITAA NVTLNSCLEE SKLTLSGQDM LKVMNGKMEI KDLLEKELFH SYSSVIKTAK EKIVADLALE RNELLSLDSF FSDEITYPLE VKQECLYSFK QQIVNQVEKL KVRHKCNIAR TLSEFHDVAQ RMVHEALDFD VGFSIGCFAK EFDLHLPDFI EGTGIAFESA SNLFIRTRHG SVVPIDYSVG NTSYDPDGNG SRVVLLSGVN SGGKTSLLEL VAQCVILAHM GFPTPAVNME IGLAEEFYHF GKSKGTLDAG AFETTLVDFS VVANDSPKLV LADELESITE PGASAKIISG ILEVLSENDN GMSIFVSHLS ELILENTECN VRVDGIEASG LDKDLNLIVE RTPRYNYVAK STPELIVERL SRKSNGLEQD FYKRLQKKFK
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