Gene Mbur_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1250 
Symbol 
ID3998574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp1340351 
End bp1341436 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content40% 
IMG OID637959016 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_565922 
Protein GI91773230 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000414305 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATCA ATAATATCAT ATCTTTGTAC GTCCAGCAGT TTGCAGGATC GCTTTTTGAA 
TCAACGGGAT CCAAACTGGC TGTGGCTGCA CTGATCATTA TCTCCTCAAT AATCCTTGCG
TTTGGTGTGG ATCTTGTTTT TAAGAAAGTG CTTTTGCATT ACACGGCAAA GACCAGAATC
AAGATCGATG ATCTTGTCCT CGAGGCTGTA AAACGTCCGA TCTACTATAC GTTGATATTC
TTTGGGATAT TTCTTGCCCT TTCAGTAGTC GGTATTGGAG AGTATTTCTT TATTGCCACC
AATAATCTCT TACTGACACT TCTGGCTCTG GTATGGCTAT TTGCATTGGT TAACATAAAC
AAGATATTGT TTGACAATGT TTTCCCAGGA CTTGTGCAGA AAACGGAAAC CAAAATGGAT
GATGAGCTCC TGCCATTGCT AAAAGGTTTG TCCGATATCA TCATCGTACT TGTCGGTTTA
GGTATGATCA TCGAAGGTGT ATGGGGAATA AATGTAGGTC CTCTCTTCGC ATCTGCCGGA
ATCGTTGGTA TTGCTATTGC GTTTGCTGCA AAGGATGCTA TATCCCAATT CTTTGGTGGC
CTTTCCATCT ATTATGACAA GCCGTTCAAG AATGGTGATC GTATAGAGAT CGGTGATGGT
CAGATAGGGC TCGTGCAGGA AGTAGGTATC AGAAGTACTC GTATACTTGA TTTTTACAAC
AATATGATAA TAATTCCAAA TAGTATCATT GCAAACAACA AGATCATCAA CTACACTTCT
CCCCAACCCC AGATGATGGT AAAAATAACT ATCGGGGTAG AATATGGTTC TGACGTTTCA
AAGGTAAAGG AGGTCCTGCT TAAGATCGGA AATGATATCG ATCTCGTTCT GGATGATCCG
TCACCTTCTG TTCGTTTTGA TAATCATGGG GATTTCAGTC TTGATTTTGC TTTGATACTC
TGGGTAAAAT ATCCTTCCGA GAAGTTCAGT GTCATCAACG AAGTAAATAC TATGATAGAT
ATCGAGTTCA AAAAAGCAGG TATCGGGATA CCATTTCCCA CATATACCTT GTTGAAGCCT
GAATGA
 
Protein sequence
MQINNIISLY VQQFAGSLFE STGSKLAVAA LIIISSIILA FGVDLVFKKV LLHYTAKTRI 
KIDDLVLEAV KRPIYYTLIF FGIFLALSVV GIGEYFFIAT NNLLLTLLAL VWLFALVNIN
KILFDNVFPG LVQKTETKMD DELLPLLKGL SDIIIVLVGL GMIIEGVWGI NVGPLFASAG
IVGIAIAFAA KDAISQFFGG LSIYYDKPFK NGDRIEIGDG QIGLVQEVGI RSTRILDFYN
NMIIIPNSII ANNKIINYTS PQPQMMVKIT IGVEYGSDVS KVKEVLLKIG NDIDLVLDDP
SPSVRFDNHG DFSLDFALIL WVKYPSEKFS VINEVNTMID IEFKKAGIGI PFPTYTLLKP
E