Gene Mbur_1127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1127 
Symbol 
ID3997734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand+ 
Start bp1211168 
End bp1212169 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content32% 
IMG OID637958895 
ProductCRISPR-associated Cas1 family protein 
Protein accessionYP_565803 
Protein GI91773111 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1
[TIGR03641] CRISPR-associated endonuclease Cas1, HMARI/TNEAP subtype 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.168006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGCAG ATTATTACAT ATTGCAGGAT GGGATTTTAA AGAGAAAGGA AAATACGGTC 
TATTTTGTGA ATAAGGATGA GAAGAGAGTT TTACCTATCA ATAAAATATA TTCAATTTAT 
GCATACGGTA AGTTATCCTT TTCATCAGGT GTAGTTTCAT ACCTTTCAAA AAATGGTATT 
CCGATACATT TTTTTAATTA TTATGGTTTT TATGAAGGAA GCATGTATCC ACGAGAGACG 
CTCATTAGTG GCGATCTTGT AATTCATCAA GCATCTCATT ATCTTGATAG TGAAAAAAGG 
ATGCTTTTGG CAGGAAAGTT CATTGAAGGT GCATGTGGTA ACATTCTTAA GAATTTAAAG 
TATTATTCAA GAACAAAGGA GGATTGTCAA GATGCGATGA ATTCCTATGT TAGTTCGATA 
GAATCGGAAT TAAGTCGCTT ACCAAATGCG GATTCCATTC CTAAAATGAT GAATGTTGAA 
GGGCGTATGA GATATATCTA TTACAATGCA TTGGATGAGA TATTTCCGGA AGATTATAGA 
ATTGTGACAA GAACAAGACG TCCTCCTGGA AATAAAATGA ATACTCTTAT TAGTTTTGGA 
AATTCGTTGA TGTATACGAC TGTTCTTTCT GAGATTTATA ATACTCAATT AAATCCAACT 
ATTTCTTATC TTCATGAACC TTTTGAACGA CGTTTTTCTC TTGCTCTTGA TGTGAGCGAA 
ATATTTAAGC CCATAATAAT TGATCGAATT ATTCTTAAAC TTGTTAATAA GAATATGTTA 
GATGATAATT GTTTTATGGG TGAGATCGGT GATATGCTGT TGAGTGAAAA AGGCAAGAAG 
ATATTCTTAC AAGAATATAA TTCTAAATTA AGTACTACTA TTAAACACAA AGGGTTAAAG 
CGAAATGTTT CTTATAAAAG GCTAATTAGG CTGGAACTTT ATAAATTATC AAAGCATGTG 
ATTGAAGACG AAGAATATGT TCCTCTTGTG ATGTGGTGGT AA
 
Protein sequence
MRADYYILQD GILKRKENTV YFVNKDEKRV LPINKIYSIY AYGKLSFSSG VVSYLSKNGI 
PIHFFNYYGF YEGSMYPRET LISGDLVIHQ ASHYLDSEKR MLLAGKFIEG ACGNILKNLK 
YYSRTKEDCQ DAMNSYVSSI ESELSRLPNA DSIPKMMNVE GRMRYIYYNA LDEIFPEDYR 
IVTRTRRPPG NKMNTLISFG NSLMYTTVLS EIYNTQLNPT ISYLHEPFER RFSLALDVSE 
IFKPIIIDRI ILKLVNKNML DDNCFMGEIG DMLLSEKGKK IFLQEYNSKL STTIKHKGLK 
RNVSYKRLIR LELYKLSKHV IEDEEYVPLV MWW