| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1100 |
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| Symbol | |
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| ID | 3998037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | + |
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| Start bp | 1179980 |
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| End bp | 1181284 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637958870 |
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| Product | tryptophan synthase subunit beta |
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| Protein accession | YP_565778 |
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| Protein GI | 91773086 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1350] Predicted alternative tryptophan synthase beta-subunit (paralog of TrpB) |
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| TIGRFAM ID | [TIGR01415] pyridoxal-phosphate dependent TrpB-like enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.234808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACAGA CTAAGATCCT ACTTGATGAA AACGAGATGC CTAAAAAATG GTATAATATC
CTTCCGGATA TGCCCACTCC ATTGGCTCCC CCACTTAATC CTGCAAATAA TGAGCCACTG
GCACCAGAGG ACCTTGCGCC TCTTTTCCCA ATGGAGCTCA TCAAACAGGA AATGAGCAGT
GAGAAATACA TTGACATTCC AAAAGAAGTT CTTGAAATAT ACAAGCTCTG GAGACCTGCT
CCTTTATTCC GTGCACACAG GCTTGAGAAG ATGCTTGACA CCCCTGCAAA GATCTATTAT
AAGTATGAAG GAGTAAGTCC TGCTGGCAGT CACAAGCCAA ATACTGCTGT GGCACAGGCT
TATTATAATA TGAAAGAAGG CACTGAGAGG ATAACTACCG AGACCGGAGC TGGTCAGTGG
GGAAGTGCAC TTTCACTTAG CTGTAATTAT TTTGATATCG AATGTAAGGT CTACATGGTA
CGCTCAAGCT TCGAGCAGAA ACCATACCGT AAATCCCTGA TCAATCTCTG GGGTGCAACA
GTAGTACCTT CGCCAAGTCC TGATACTGAG TTCGGACGTC ACATACTTGA AAAATATCCG
GACACTGCAG GCAGTCTTGG TATTGCTATA GGTGAAGCTG TAGAAGATGC CGTGAAGCAC
GACAATACTA AATATGCTCT TGGCAGTGTG CTCAACCACG TCATGTTGCA TCAGACAGTT
ATAGGTATTG AAGCCCAGAA ACAGCTTGAT AAGGTAGAGG AATATCCAGA TATAGTCATC
GGTTGCTGTG GTGGTGGAAG TAACCTTGCA GGAATCAGCC TTCCCTACAT GAAGGATAAG
ATCGAAGGTA CTCATGATCC GCGTATCATT GCTGTCGAGC CTTCTGCATG TCCAACACTT
TGTGACGGCA AGTTCCAGTA TGACTATGGC GACATGGCAA AACTGACCCC ACTCCTTAAG
ATGTATTCAC TCGGTTATGA TTTCATGCCA CCTGCCATCC ATGCAGGAGG CTTAAGATAC
CACGGCTGCT CACCGATAAT CAGTCAGTTG ACGGCAGATA AACTCATGGA AGCTACCAGC
TATCATCAGA TCGAGGTATT CGAAGCAGGA GTCATGTTCG CTCGCAGTGA AGGTATTCCA
CCAGCACCAG AGTCAAACCA TGCTATTAAG TGCGCTATTG ATGAGGCTCT CAAGTGCAAG
CAGACCGGAG AAGAGAAGAC CATTCTGTTC TGCCTTAGTG GACACGGTCA CTTCGATATG
TATTCCTACG ACAAGTATTT CAGTGGTGGA CTCAGCAACG AATGA
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| Protein sequence | MEQTKILLDE NEMPKKWYNI LPDMPTPLAP PLNPANNEPL APEDLAPLFP MELIKQEMSS
EKYIDIPKEV LEIYKLWRPA PLFRAHRLEK MLDTPAKIYY KYEGVSPAGS HKPNTAVAQA
YYNMKEGTER ITTETGAGQW GSALSLSCNY FDIECKVYMV RSSFEQKPYR KSLINLWGAT
VVPSPSPDTE FGRHILEKYP DTAGSLGIAI GEAVEDAVKH DNTKYALGSV LNHVMLHQTV
IGIEAQKQLD KVEEYPDIVI GCCGGGSNLA GISLPYMKDK IEGTHDPRII AVEPSACPTL
CDGKFQYDYG DMAKLTPLLK MYSLGYDFMP PAIHAGGLRY HGCSPIISQL TADKLMEATS
YHQIEVFEAG VMFARSEGIP PAPESNHAIK CAIDEALKCK QTGEEKTILF CLSGHGHFDM
YSYDKYFSGG LSNE
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