| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_1040 |
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| Symbol | |
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| ID | 3998780 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | + |
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| Start bp | 1122657 |
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| End bp | 1123712 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637958816 |
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| Product | tRNA splicing endonuclease |
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| Protein accession | YP_565725 |
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| Protein GI | 91773033 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000000280827 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGCAG AGATAGTAAA GGACCGTGTA CTTGTAGAAA AAAAAGCTAT TAATGAGTTT
TACAATAATG GGTACTACGG CAGGCCTAAA TCGAGCGGGC TTGAGCTCAC ACTTATCGAA
GCTGTATATC TGGCATTCCG CGGGAAGATA GAGGTGGAAC ATGAAGGAAA GGTCCTGGAG
TTTTCCGATC TTTTCAAGGA AGCTTCCATC TTGCAGCCCT CCTTCGAGCT TAAATATATC
GTTTACAAGG ACCTGAGAGA ACGAGGGTTC TACGTACAAC CCGGTGTGAC CGATTTCCGC
GTATACCCAC GTGGCAGCCA TCCCGGAAAG GGAGCGGCAA AGCAGTTCAT CTATGTAAGG
TCAGAAAGAG CACCAATGCC ACTGAGGGAC CTCTTGCGTT CCCTTGCAGC AGCCGAAAAC
GTTAGAAAGC AGATGGTACT CGCCATTGTA GATGAAGAGA GTGACATTAC TTTCTACGAT
GTGAAAAGGC CACGCTTAAA AGGCGAGATG AAGGAACCCC TTTACCCAGA CATCAATGCA
GATGCCACTT TCCTTGAGGA CAGGGTTGTC GTATGGGATG AGGAAGCTTC GAAAACCCTT
TTTGAGAATG GCTTTTACGG GAAACCATTG GATAGCCAGA GATTGCAGCT TTCACTTGTT
GAGTCCCGAT ATCTCCTTGA GAAGGGTGTC CTCAATATCA ACAACAGACA GGATGAATCC
ATGGATGTGG ATGCTTTTTC AAAGATGGCT TCGGAGATTG AACCCGAGTT CAATCTGAAG
AGCAGTGTTT ACACAGATCT TCGAGATAAA GGGGTCGTAC CAAAGACAGG TTTCAAGTTC
GGTAGTCATT TCCGTGTTTA TTCACAGGTG GAATCACCAA CAAAGATACC GCATTCCGAA
TATCTCATAC ATTCGATACC AATGGACCAT GAATTTACAC TCCCTGTCAT GTCAAGGGCC
ATAAGGCTTG CCAACAGTGT AAGAAAGAGG ATGCTTTATG CGATCCTCAC AGATGATGGT
GTCGATTACA TCGATATTGG CAGATTAAAG ATGTGA
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| Protein sequence | MRAEIVKDRV LVEKKAINEF YNNGYYGRPK SSGLELTLIE AVYLAFRGKI EVEHEGKVLE
FSDLFKEASI LQPSFELKYI VYKDLRERGF YVQPGVTDFR VYPRGSHPGK GAAKQFIYVR
SERAPMPLRD LLRSLAAAEN VRKQMVLAIV DEESDITFYD VKRPRLKGEM KEPLYPDINA
DATFLEDRVV VWDEEASKTL FENGFYGKPL DSQRLQLSLV ESRYLLEKGV LNINNRQDES
MDVDAFSKMA SEIEPEFNLK SSVYTDLRDK GVVPKTGFKF GSHFRVYSQV ESPTKIPHSE
YLIHSIPMDH EFTLPVMSRA IRLANSVRKR MLYAILTDDG VDYIDIGRLK M
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