Gene Mbur_1000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_1000 
Symbol 
ID3998105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand+ 
Start bp1083437 
End bp1084084 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content49% 
IMG OID637958780 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_565689 
Protein GI91772997 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA AGAACCGACT CATCCTTGCT CTGGATGTAA CTGACAGAGA GAATGCCCTT 
CGTATCGCTA ATGAAGTTTC CGACTATGTG GATTCTATAA AGGTAGGATA TCCGCTGGTC 
CTTGGGGAAG GCCTTAGTAT AGTCAAGGAA CTTGTGGAAA TTGCACCAGT TATCGCTGAT 
TTCAAGGTTG CTGACATACC AAATACTGAC CGACTTATCT GTGAACACGT GTTCAATGCC 
GGAGCTGCCG GGATAATCAC CCACGGATTC ACAGGTCGCG ACAGCCTTGA TTCCTGTGTA 
AAGGTTGCTA ATGAATTTGG GACTGACGTT TATGTGGTCA CAGAGATGAG CCACCCGGGT 
GGTGTGGAGT TCTTCCGCCC GGTTGCCGAG GATATTGCCA GTATGGCAGT GGAAGCAGGA 
GCCTCCGGAG TTGTAGCGCC TGCAACAAGA CCTGAAAGAG TAAAAGACAT ACGCAAGATC 
ATCGGAGAGG AACTTAGCAT TATCTCACCC GGCGTGGGAG CTCAGGGAGG CAGTGCTGCC 
GATGTTATAA GAGCAGGTGC TGACTGGGTG ATAGTCGGAC GAAGCATCTA TAATTCCGAT 
TCTCCGGCAG AAGCTGCAAA GAAGATATGC GATGAAATGA ATTGTTGA
 
Protein sequence
MEKKNRLILA LDVTDRENAL RIANEVSDYV DSIKVGYPLV LGEGLSIVKE LVEIAPVIAD 
FKVADIPNTD RLICEHVFNA GAAGIITHGF TGRDSLDSCV KVANEFGTDV YVVTEMSHPG 
GVEFFRPVAE DIASMAVEAG ASGVVAPATR PERVKDIRKI IGEELSIISP GVGAQGGSAA 
DVIRAGADWV IVGRSIYNSD SPAEAAKKIC DEMNC