Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_0896 |
Symbol | |
ID | 3998640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | + |
Start bp | 962859 |
End bp | 963548 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637958678 |
Product | ABC transporter, ATPase subunit |
Protein accession | YP_565594 |
Protein GI | 91772902 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.00595939 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGTG TTATAATAAA AACTGAAAAT ATTGAGAGGG TATACATTAC AGGTCCAGTA AAAACATACG CTTTGAAAGA TATCAGTGTG GAGATATATG AAGGTGAGTT TGTAGCCATT ATGGGGCCAA GTGGAAGTGG TAAAAGTACT TTATTGCATC AACTGGGTCT TTTAGACACG CCAACTAATG GAAAAATTAC CATAGATGAT AATGATATCA TAAATCTTTC TGATGCAAAG AAAACACAGT TTAGACTTGA TAAATTAGGT TATGTTTTTC AATCATACAA TCTAATTCCC GAACTTACAG CTCTTGAAAA TGTTTATATT ACAGATATGG CTAGAGGTTT GGGAAAAGAA AAGTATGAAA AAAAAGCAAA AGATATCCTT GAAGCCGTAG GGTTAGGAAA CAGGATAGAT CATTATCCTT CTGAACTTTC AGGAGGGCAA CAGCAAAGGG TGTCCATAGC TAGGGCATTG GTAAATGAGC CAAAAATACT ATTTGCAGAT GAACCTACTG CTAATCTGGA CACAGATTCT TCCAAAGAAG TAATAGATCT ATTTAGGAAA TTCAATAAAG AAATTGGTCA GACAATAGTT ATGGTAACTC ACGAAGAAGA AGAAGGCCTA AAAGCAGATC GGATCATTTG GGTAAAGGAT GGCTTGTTAG ATAAAGATAA AATAAAATAA
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Protein sequence | MKGVIIKTEN IERVYITGPV KTYALKDISV EIYEGEFVAI MGPSGSGKST LLHQLGLLDT PTNGKITIDD NDIINLSDAK KTQFRLDKLG YVFQSYNLIP ELTALENVYI TDMARGLGKE KYEKKAKDIL EAVGLGNRID HYPSELSGGQ QQRVSIARAL VNEPKILFAD EPTANLDTDS SKEVIDLFRK FNKEIGQTIV MVTHEEEEGL KADRIIWVKD GLLDKDKIK
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