Gene Mbur_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0896 
Symbol 
ID3998640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp962859 
End bp963548 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content34% 
IMG OID637958678 
ProductABC transporter, ATPase subunit 
Protein accessionYP_565594 
Protein GI91772902 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.00595939 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGTG TTATAATAAA AACTGAAAAT ATTGAGAGGG TATACATTAC AGGTCCAGTA 
AAAACATACG CTTTGAAAGA TATCAGTGTG GAGATATATG AAGGTGAGTT TGTAGCCATT
ATGGGGCCAA GTGGAAGTGG TAAAAGTACT TTATTGCATC AACTGGGTCT TTTAGACACG
CCAACTAATG GAAAAATTAC CATAGATGAT AATGATATCA TAAATCTTTC TGATGCAAAG
AAAACACAGT TTAGACTTGA TAAATTAGGT TATGTTTTTC AATCATACAA TCTAATTCCC
GAACTTACAG CTCTTGAAAA TGTTTATATT ACAGATATGG CTAGAGGTTT GGGAAAAGAA
AAGTATGAAA AAAAAGCAAA AGATATCCTT GAAGCCGTAG GGTTAGGAAA CAGGATAGAT
CATTATCCTT CTGAACTTTC AGGAGGGCAA CAGCAAAGGG TGTCCATAGC TAGGGCATTG
GTAAATGAGC CAAAAATACT ATTTGCAGAT GAACCTACTG CTAATCTGGA CACAGATTCT
TCCAAAGAAG TAATAGATCT ATTTAGGAAA TTCAATAAAG AAATTGGTCA GACAATAGTT
ATGGTAACTC ACGAAGAAGA AGAAGGCCTA AAAGCAGATC GGATCATTTG GGTAAAGGAT
GGCTTGTTAG ATAAAGATAA AATAAAATAA
 
Protein sequence
MKGVIIKTEN IERVYITGPV KTYALKDISV EIYEGEFVAI MGPSGSGKST LLHQLGLLDT 
PTNGKITIDD NDIINLSDAK KTQFRLDKLG YVFQSYNLIP ELTALENVYI TDMARGLGKE
KYEKKAKDIL EAVGLGNRID HYPSELSGGQ QQRVSIARAL VNEPKILFAD EPTANLDTDS
SKEVIDLFRK FNKEIGQTIV MVTHEEEEGL KADRIIWVKD GLLDKDKIK