Gene Mbur_0888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0888 
Symbol 
ID3996886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand+ 
Start bp953362 
End bp954009 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content41% 
IMG OID637958671 
Productlysine exporter protein LysE/YggA 
Protein accessionYP_565587 
Protein GI91772895 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.668433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAC TTCTCAAAGC ACTGGCCCTG GGATTTACAA TAGGTATCTC AGCTGCACTT 
ATCCCGGGTC CAATGATGTT TGCTACTGCT GGCATCTCAC TAAATAAAGG CTGGCGTACA 
GGTCCGTTCG TCTTCCTTGG CCACTCAATG GTGGAACTAA CAGTGATCCT TTTGGTCATT 
GCAGGAGCAT CCTCTTTCAT AAGTGATTCC ACTATTGGCT ACGTATCAAT ATTGGGTGGT 
ATTGTAATGA TCATTTTTGG GCTTGTTCTT CTAAAAAGTG CTAAAAGCGT TTCAAATATC 
AATATCGCTG AATCTGCCAA AAAATTCAAA GGTTCAGTAG GCCCGGTGTC TGCAGGCATA 
CTGACCACTG CTCTGAATCC TGCATTTATT CTATGGTGGC TCACTGCCGG AAGTGCAATT 
ATATTGCAAG AATATCTCTT AGGTATGTTT GCGATCGTCG CATTCCTTAT TGGTCATTGG 
CTTGCAGATT TCACCTTCCT TTTGACCGTT GCATCATCGA CAGTTAAAGG AAAAGACCTT 
CTCTCTGAAA AAACACATAG AAAGATACTC TATTTTTGCA GTGTTTTCCT CATGATATTC 
GGTGTATGGT TTGTATCGAA CTACAACAAC ATATCTTCAT TTGTGTAA
 
Protein sequence
MIELLKALAL GFTIGISAAL IPGPMMFATA GISLNKGWRT GPFVFLGHSM VELTVILLVI 
AGASSFISDS TIGYVSILGG IVMIIFGLVL LKSAKSVSNI NIAESAKKFK GSVGPVSAGI 
LTTALNPAFI LWWLTAGSAI ILQEYLLGMF AIVAFLIGHW LADFTFLLTV ASSTVKGKDL 
LSEKTHRKIL YFCSVFLMIF GVWFVSNYNN ISSFV