| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0785 |
|---|
| Symbol | |
|---|
| ID | 3996690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 820522 |
|---|
| End bp | 821463 |
|---|
| Gene Length | 942 bp |
|---|
| Protein Length | 313 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 637958575 |
|---|
| Product | transposase, IS4 |
|---|
| Protein accession | YP_565491 |
|---|
| Protein GI | 91772799 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3039] Transposase and inactivated derivatives, IS5 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTTAA CAAACTTTGC TTTTAAAGAA GAGTACAAAC GTCTTGAAAA TCTCGGTGAC
AAGCTCTCTG AAATTGAATC TCTCATCGAT TGGAAACCAT TTCGTCCAAT TATAGCAGAG
ATGTATATCA ATAAAACAGA GTTCGGTGGC AGACCAAACG TTGATGAAAT CGTCATGCTC
AAAATGTTAG TATTGCAACA ATGGCATGGC CTATCTGACC CTGAACTTGA AAGACAAGCT
ACTGATAGAA TTTCCTTTAG GAAATTCTTG GGCTTTCCTG CAAAAATTCC AGATCATACT
ACTGTTTGGG CATTTAGAGA ACGAATTTCC CAGGCAGGAA AAGAAGATGA AATCTGGAAT
GAAATGCAAA GACAACTTAA TAAGAAAGGT CTGAAGATCA AGCAAGGTAT GATTCAGGAT
GCAACATTTA TACATGCTGA TCCAGGACAT GCAAATCTTG ATACTCCTCG TGGAAATGAA
GCAAAGACCA GAAGATGTAA GGACGGTACA TGGACAAAAA AGGCATCTAA GTCACATTTT
GGATATAAAC TACATACCAT TGAAGATACC GAATATGATC TGATAAGGAG ATATAGGACA
ACTACTGCCT CAGTTCATGA TAGTCAGGTG GATCTTTCTG AAGAAGGCGA AGTTGTTTAC
AGAGATAGAG GTTACTTTGG TGCAATTTCA AAAGGATATG ATGCAACTAT GCAAAGGGGA
GTACGAGGGC ACCCTATTGG TATTAGGGAT AAGATGAGAA ACAAAAGAAT AAGCAGGAAA
AGAGCAAAGG GAGAAAGACC TTATGCTGTT ATCAAAAATG TGTTTACGTC AGGATTTGTA
AGAGTAACAA CGTTGGCAAG AGTAAATGTC AAAATGGCGA TTACAGCATT CAGCTATAAT
CTCTATCAAT TGAGGACAAT AAGAAGAAAA TCATTAGGAT GA
|
|---|
| Protein sequence | MSLTNFAFKE EYKRLENLGD KLSEIESLID WKPFRPIIAE MYINKTEFGG RPNVDEIVML
KMLVLQQWHG LSDPELERQA TDRISFRKFL GFPAKIPDHT TVWAFRERIS QAGKEDEIWN
EMQRQLNKKG LKIKQGMIQD ATFIHADPGH ANLDTPRGNE AKTRRCKDGT WTKKASKSHF
GYKLHTIEDT EYDLIRRYRT TTASVHDSQV DLSEEGEVVY RDRGYFGAIS KGYDATMQRG
VRGHPIGIRD KMRNKRISRK RAKGERPYAV IKNVFTSGFV RVTTLARVNV KMAITAFSYN
LYQLRTIRRK SLG
|
|---|
| |