Gene Mbur_0727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0727 
Symbol 
ID3996631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp753424 
End bp754860 
Gene Length1437 bp 
Protein Length478 aa 
Translation table11 
GC content30% 
IMG OID637958526 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_565442 
Protein GI91772750 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.207142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTACTA TTGAAAATAT TGTAAAGAAT ACTAGTTTTT TACTTGTAGG TAGGTTATCG 
ACTAAAATTA TTAGTTTTTT TATTTTGCTT TATATAGCGC GTTATCTAGG CCCAGACGAT
TTTGGAAAAT TTTCGTTTGT TTTTGCATTT GTATACTTTT TTGCTTTCAT CCCAGATTTA
GGTATTCATA ATATACTTGT TCGTGAAGCT GCAAAGGAAC CGGCAAATGC TGGCATATTA
ATAGGAAATG CTACTGCAAT AAAAATAGTA CTTTCGTTAA TCGCTATTTT TCTGGCATTT
TTCACAATAA ATTTAATGGA TTATCCTATT TCTACAAAAA ATGCGTTATA CTTAGCTTCG
ATTGGATTAC TAATTACCAA TCTGAGTGCA TTTGGAATTA TATATGAAAT TAAGCTCAGA
ATGGAGTACT CAGCACTTTT TAGTGTGACG AGTAGGATAA TTTTCTTAAT GCTGGTTCTT
TATGGTGTCC TCCAGAACTC AACTTTACTT TTTTTTGTAT TTGCCTCGAT TTCAGCTGAT
TTTGTACATA ACATATTAAT GGTTGTGTTT TCAAAAAGGT TCGTCAATGT ACAATTTAAT
TTTGATTACA AACTAATTAA ACAGATTTTA CATGAAGCAT TACCGATAGC ATTGGCTAGT
GTTTTTGTTA TGATTTATTT TAGAGTTGAT ATATTAATGT TATCTTTTTT AAAAAATGAT
GTTGATGTGG GACTTTACAG TGCTGCCTAC CGTTTTACGG AAGCTTTCAT ATTTGTACCT
TCTATATTGA TGACTTCAAT GTTTCCATTA ATGTCGAAAT ATTTCAAAGA ATCATTTAAT
CTATTTGTTT ATTCATATGT CAAATCCTTT AAGTACCTCT TTGCTTCCGG TTTGATACTT
GCAATCATAG TATCCTTCCT GGCTGATGTC ATTATTTTAA AAGTGTATGG ATTAGAATAT
AGTGGTTCGA TATCTGCATT ACAAATTTTG ATATGGGCAA CTTCGATTAT GTTTATAAAT
ATTCTTCTTA GCTTTACGTA TATCTCAAGT GGAAACCAGG GTGTAATGGC AAAGTTGACA
GCTTTTGCAG CGTTTTTCAA TATAGCATTA AATTTCATAT TCATTCCATC TTTCAGTTAC
AATGGAGCAG CAATTTCGAC TATGATTACT GAACTTGTAG TAATGGTATT TGGAATATAT
TGGATCAACA AAAACATTTG CCATAAAAGT TTGTTTAATG AGGGTGTTTA TCCCTTGATT
GGTGTTCTTA TAATACTGTT ATTTTACACA ATGTTCAAAT TATATGTTAA TAATTTTATT
CTTTGTGCAG TATCAATATT AATCTATATT GGTGTACTTT ATGGCACAGG ATGGATTGAT
TCAGATGATA AAAACTTCGT AATAAAAGTG ATCAACCACC TAAAAACTTA TTTATAA
 
Protein sequence
MSTIENIVKN TSFLLVGRLS TKIISFFILL YIARYLGPDD FGKFSFVFAF VYFFAFIPDL 
GIHNILVREA AKEPANAGIL IGNATAIKIV LSLIAIFLAF FTINLMDYPI STKNALYLAS
IGLLITNLSA FGIIYEIKLR MEYSALFSVT SRIIFLMLVL YGVLQNSTLL FFVFASISAD
FVHNILMVVF SKRFVNVQFN FDYKLIKQIL HEALPIALAS VFVMIYFRVD ILMLSFLKND
VDVGLYSAAY RFTEAFIFVP SILMTSMFPL MSKYFKESFN LFVYSYVKSF KYLFASGLIL
AIIVSFLADV IILKVYGLEY SGSISALQIL IWATSIMFIN ILLSFTYISS GNQGVMAKLT
AFAAFFNIAL NFIFIPSFSY NGAAISTMIT ELVVMVFGIY WINKNICHKS LFNEGVYPLI
GVLIILLFYT MFKLYVNNFI LCAVSILIYI GVLYGTGWID SDDKNFVIKV INHLKTYL