Gene Mbur_0598 details

Gene Information

• Locus tag: Mbur_0598
• ID: 3996810
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 608833
• End bp: 609507
• Gene Length: 675 bp
• Protein Length: 224 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637958401
• Product: CRISPR-associated Cse3 family protein
• Protein accession: YP_565319
• Protein GI: 91772627
• TIGRFAM ID: [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000000000000163206
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTCGAG CAAAATTGCT TCCTGAAGCC ATGTCAAGCA AGGCTATACG GGGCAATATG 
GGGAACGAGC ATAATGTTCA CCGTCTGGTG TGGTCTTTAT TTCCAGTGAA TGAGGATGAT 
AAGAGAAAAT TTATCTATCG GCAGGATTCG ATGGGTAGCT TGCCATCTTT CTATTTAGTG 
TCTGAAAATG AACCAATTGA TGAGCTCAAT GTTTGGGACA TTGATGTGAA ACAATATGAT 
CCTATATTGA AGTCTGGTCA GAAACTTGCA TTTTCTCTTC GTGCCAACCC AATTGTTTCA 
AAAAGAGATG AAAATGATAA ACAACACCGA CATGATGTAG TCATGGATGA AAAGTTCCGT 
TTGAAGATGG AAAATGGTGG GGATATTGAA CCCAATATGC CAGACATTGT ACAGAGAAAG 
GGGTCTGAGT GGTTGCTAAG AAAGGGTGAC ATGAACGGAT TCTCGATCAA TGCTGAACAG 
ATTCGTGTAG ATGCTTATCA GAACCATAAG TTGTTCAAAC CAAAAGGTAA GCACCATGTT 
AGCTTCAGCA CTGTTGATAT TGTGGGTACT TTAACTGTTA CTGATCCAGA TATTTTCAGA 
GATGCTTTGT TTAAGGGAAT TGGACCTGCA AAAGGGTTCG GTTGCGGTAT GCTTCTTGTC 
AGGCCTTTAC GTTGA 

 

Protein sequence

MSRAKLLPEA MSSKAIRGNM GNEHNVHRLV WSLFPVNEDD KRKFIYRQDS MGSLPSFYLV 
SENEPIDELN VWDIDVKQYD PILKSGQKLA FSLRANPIVS KRDENDKQHR HDVVMDEKFR 
LKMENGGDIE PNMPDIVQRK GSEWLLRKGD MNGFSINAEQ IRVDAYQNHK LFKPKGKHHV 
SFSTVDIVGT LTVTDPDIFR DALFKGIGPA KGFGCGMLLV RPLR