Gene Mbur_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0597 
Symbol 
ID3996809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp608089 
End bp608823 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content43% 
IMG OID637958400 
ProductCRISPR-associated Cas5e family protein 
Protein accessionYP_565318 
Protein GI91772626 
COG category 
COG ID 
TIGRFAM ID[TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000000345339 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGAAT ATTTGATTTT TCGCCTGTAT GGTCCAATGG CTTCATGGGG TGATATTGCA 
GTAGGTCAGC ATAGGCCTAC CTATGACCAC CCATCGAAGT CTGCAATTTT CGGATTGATA
GCGGCTGCTC TTGGAATACG TAGGGATGAG GAAGAGAGGC ATTTGGAACT TTCAAATGCT
TATAGCTATG GCACTCTTAT TAATTCAGCA GGGAAATTGC TTCGTGATTA CCATACTTCA
CAGGTGCCTT CTGCTGGAAC AGGCAGGAAC AGAAAGACAT TTGCTACCAG AAAGGATGAG
CTTGCAGTTC CAAAAGAGGA GCTTAACACG GTTCTTTCCA CAAGGGATTA TTATTGCGAT
GGGGTTTATA CGGTCATACT GTCATGTAAG ACAGATACTC CCCCATATTC TCTGGAGCTT
CTCGGCAACA GTTTGAAAGA ACCTTCATTT TGTCTTTATC TAGGCCGTAA GTCATGTCCT
TTGGCACTTC CAATCAATCC AAAAATAGTG TCTGCTTCCA ATATAAAGGA AGCTTTGCAG
AGTGTTGATC CTGGAGAGGA AGGACTTGTA AAGAAGATCG AGATGAAGAG TCCTTACAGA
CTTTATTGGG ATGATCCTAA GGAATCGATG ACCTGTGAGC ATACTATATC CAGGTATGAT
AAACTGTTGA GCCGTAAAAG GTGGCAGTTT TCGAAACGGA ATGAGTACTA TGCAATGGTT
AGTTTGGAGG GATGA
 
Protein sequence
MKEYLIFRLY GPMASWGDIA VGQHRPTYDH PSKSAIFGLI AAALGIRRDE EERHLELSNA 
YSYGTLINSA GKLLRDYHTS QVPSAGTGRN RKTFATRKDE LAVPKEELNT VLSTRDYYCD
GVYTVILSCK TDTPPYSLEL LGNSLKEPSF CLYLGRKSCP LALPINPKIV SASNIKEALQ
SVDPGEEGLV KKIEMKSPYR LYWDDPKESM TCEHTISRYD KLLSRKRWQF SKRNEYYAMV
SLEG