Gene Mbur_0596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0596 
Symbol 
ID3996808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand+ 
Start bp606965 
End bp608068 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content44% 
IMG OID637958399 
ProductCRISPR-associated Cse4 family protein 
Protein accessionYP_565317 
Protein GI91772625 
COG category 
COG ID 
TIGRFAM ID[TIGR01869] CRISPR system CASCADE complex protein CasC/Cse4 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.00000000000866758 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAT TTATACAAAT ACACACACTC GTTTCATACC CACCATCGAA TTTGAACCGC 
GATGACCTGG GAAGACCAAA GACTGCCGTA ATGGGTGACA CTCAGAGGCT GAGAGTGTCT 
TCACAGAGCT TGAAGAGAGC ATGGAGAACG TCAGATGTGT TCAAAGAAGC TCTTGGGGAC 
CACATAGGCA TTCGTACCAA AGGTATGGGT GTGAGCATTT TCAAGGCATT GACAGAAGGT 
AGCAGATTAA AGGATGTACT GGACAACGTA ACTGCACCTG TGGTAAATGA ACTAGTAGAA 
GAGAAGATTG CTAAGGAATG GGCAAAAATG ATTGCTGGAG TCTTCGGCAA GTCCAAAAAA 
GACACTGAGG ATTCACTTAC CGGGCTCGAG ATCGAACAAT TGACACACTT CAGTCCAGAA 
GAGATAACTG CAATCGATGA ACTGGTTTCA AAAATAGCTG CCAGTGGTAC TGCTCCTTCA 
AAGGATGACC TCGATCTTTT GAGAAAGGAT CATACTGCTG TGGATATCGC TATGTTCGGA 
AGGATGCTTG CATCAAATAC TAAATTCAAT ACCGAAGCTG CTGTACAGGT TTCCCATGCG 
ATCACAGTAA ATAAAGTTGC AGTAGAGGAT GATTTCTTCA CTGCTGTGGA TGATCTGAAC 
CGAGGTGAAG AGGATATGGG TTCAGGGCAT CTTGGTGAGA CTGAGTTTGC ATCCGGACTT 
TTCTATACAT ATATCTGTGT TGACCGTGAA CTTTTGGAAA GCAATCTCGG CGGGGATAAG 
GAGCTTGCAG ATAAGTCTGT GCGTGCTTTG GTCGAAGCAA TGGCCAAGGT ATCACCTACG 
GGTAAGCAGA ACAGTTTTGC TTCAAGAGCA TACGCATCAT ACATGATGAT CGAGAAAGGA 
AAACAACAGC CACGTTCGCT TTCTGTCGCT TATCTTGAAG CGGTTAAAGG GAAAAGCATG 
TTGAAGGATG CAATTGAAGG CCTCAAGCAG ACAAATGAGA ACATGGAGAA GGTCTATGGT 
CCATGTTGTG AGGATAGGTC TGAGATGAAT GCATACACTG GTGAAGGTAC CTTGACCAAG 
ATGCTTGATT TCGTTACTAA TTAA
 
Protein sequence
MTKFIQIHTL VSYPPSNLNR DDLGRPKTAV MGDTQRLRVS SQSLKRAWRT SDVFKEALGD 
HIGIRTKGMG VSIFKALTEG SRLKDVLDNV TAPVVNELVE EKIAKEWAKM IAGVFGKSKK 
DTEDSLTGLE IEQLTHFSPE EITAIDELVS KIAASGTAPS KDDLDLLRKD HTAVDIAMFG 
RMLASNTKFN TEAAVQVSHA ITVNKVAVED DFFTAVDDLN RGEEDMGSGH LGETEFASGL 
FYTYICVDRE LLESNLGGDK ELADKSVRAL VEAMAKVSPT GKQNSFASRA YASYMMIEKG 
KQQPRSLSVA YLEAVKGKSM LKDAIEGLKQ TNENMEKVYG PCCEDRSEMN AYTGEGTLTK 
MLDFVTN