| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0560 |
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| Symbol | |
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| ID | 3996991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | - |
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| Start bp | 566998 |
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| End bp | 568206 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637958367 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_565285 |
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| Protein GI | 91772593 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00182957 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGT TATTGCTAAA TGGTCATGGA ATCAATATGC GTGTTGATAG TGCAAAACTC
CATATCAAAG ATGGCAGATT CTCAACAACT GAAGATCCTG AAGAGTATGT GTTCTCTCCT
AAGAGGATGG ATATTGATAG CATTGTTGTG TATGGGAGAA GTGGATCTCT AAGCCTCGAA
GCTATCAGAT GGTTGATTAA ACATAATGTA CAGATTACTA TTTTAGATTG GAACGGTAAG
CTTCTAACAA CAATGCTTCC TTCTGAAAGT ACCAATGTAA AGACAAAGTT TGCTCAATAC
CATGCTTATG AAGATCAGGA TACAAGAGTA AAGCTTGCTA AGAAGTTTAT TGAAGCCAAG
TTCTCCAAAT CTGAGGCTGT TCTTGATTAT CTTAAACTAA GGTATCCTGA GATTAATTAT
GATATCTCCG TTGATAAGGG TAAACTTGAG AATGCTAAAT CTGTAAGGGA GATCTTAGGT
GTTGAAGGTG GAGTTGCTTG GAAGTACTGG AATGAGTATG CTAAAGCTAT TCCTGAAGAA
TATGATTTCA GGGCAAGGAC TGATAATAAT GCCAGAGCAT CTAACTCAGG CGATAAAGTT
AATGTCATGC TGAATTATGG GTATGCTTTG CTTGAATCTG AATGTTTGAG AGCCATTAAT
TCAGTTGGTC TTGATGCTCA TGTAGGATTC CTTCATGAGA TGAATCCAAG TAAGAATAGT
TTAGCCTATG ATCTCCAAGA ACCGTTCAGG TTTATTGTTG ATCTTACTGT AATGAACCTG
ATTGAAAAGG GAATTATGGA TAGTAAGGAC TTTATCAGGA CTGAGAGTTT TTCATTGAGA
TTGAGACCTA CTGGAGCAAG GAAGGTTACT GAAGAGTTTA ATTCTGTGAT GAATGGTAAA
GTCGAGTATA GGAAGAAGAA TAGCTCTTGG GGATCTGTAC TATTGCTCAA GGCAAGAGAG
CTGAGTCATC ATCTTGTTGG GAAGAGGAAA ACGATTGAGT TTGTTAAGCC TGTTTATATC
AATGAAAGGG ATGATACTGA TCTGTTGAGG AAGACGATTA TTGATATGCC TTATACCGAG
TGGAAGAAAA TGGGGTTCTC AAAGGGTACA TTGAACTATA TGAAACAGAA TGCCAATAGT
GAGAAGCCGT TTACATTAAA TGTCCATGTA AGAGAGAGGT TAGAGAATTG GGGGAGTATT
GTTGAATGA
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| Protein sequence | MKLLLLNGHG INMRVDSAKL HIKDGRFSTT EDPEEYVFSP KRMDIDSIVV YGRSGSLSLE
AIRWLIKHNV QITILDWNGK LLTTMLPSES TNVKTKFAQY HAYEDQDTRV KLAKKFIEAK
FSKSEAVLDY LKLRYPEINY DISVDKGKLE NAKSVREILG VEGGVAWKYW NEYAKAIPEE
YDFRARTDNN ARASNSGDKV NVMLNYGYAL LESECLRAIN SVGLDAHVGF LHEMNPSKNS
LAYDLQEPFR FIVDLTVMNL IEKGIMDSKD FIRTESFSLR LRPTGARKVT EEFNSVMNGK
VEYRKKNSSW GSVLLLKARE LSHHLVGKRK TIEFVKPVYI NERDDTDLLR KTIIDMPYTE
WKKMGFSKGT LNYMKQNANS EKPFTLNVHV RERLENWGSI VE
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