Gene Mbur_0548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0548 
Symbol 
ID3996979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp554311 
End bp555768 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content42% 
IMG OID637958356 
ProductTrk-type K+ transport systems membrane subunit 
Protein accessionYP_565275 
Protein GI91772583 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0168] Trk-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00933] potassium uptake protein, TrkH family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGAGC TACACACTCC TGTTAACCAC AAAGCTGTAG CAAAGTACAT TGGATATTAC 
CTCATAGCTT TTACGTTTGT ATTGGTCGTT CCGACAATTG CTGCACTCGT ACTTGGAAAT
GTAGATGCGG CCATCGATTA TGGAAGCACT GCTGTTGCAG TGTTCATCAT TGGCTCTTTG
ATCTATCGTG CTCTTCCGGA CTATGACCTT GAAACGAAGG AAGCACTCAT CATCGTTGCA
CTGGTTTTCC CGATCTCAGC ATTCCTGAGT GCTGTCCCAA TGTCACTTAC AACAGGAATG
CCTTTTATTG ATGCTTATTT TGAAAGTGTG TCAGCTGTTA CGACAACAGG ACTCAGTGTT
GCACCTGCAG ACGTAGGACC CGTTTTCCTG TTTGCACGTT CCTGGGGACA GTGGGTGGGC
GGAATCGGAA TAATTCTTGT GGTGCTTTCT GTCCTGATAC GACCCGGAAC CACAGCATCC
AGGATGTACA AAGCCAACTA TGGGGATATG AAGATCAAAC CAACTGTAAT ATCCACCACC
CGTACCCTTG GAAAAGTCTA CATTATCATA ACATTGATCT CCTTAATACT GCTTTTAATG
AGTGGTATGT CCCTGTTCGA TTCGATTTGC CACGCCCTCT CTTGTGTATC CACCGGTGGA
TTTTCAACAC GTCCTGAAGG TATAAGAGCA TATCAGGGAA GCCTTATACC CACTGCAATA
AGTATATCGT GTCTTCTGGG AGCAGTCAGT TTTGTACTTT ATCCTCACCT CTTCAAGAAA
CCGGAGAAGA TCTTCAAAAA TCTGGAACTT CGGTATTTCC TGGCCTTCAT CGCCATAGGA
TCAATTGTTT TTGCTTTTAC TCTTGAAAGA GGAAATACGG ACTATGATCT AATACAGGAC
AGTCTTTTTC AGATAATTAA TGCAATCACT ACTGCGGGTT TTTCTACGAT AGACCTTTCC
ATTTTGTCTG AAGCTTCAAA AGCAGTGTTG ATATTTATGA TGTGGATAGG AGGTAATGTT
GGATCCACTG CAGGTGGGAT CAAAGTATTA AAAGTGATCT TGCTCTTAAA AGTGGTTCAT
AATGTACTGT TGAGATTGTT CCTGCCCAGA GAGACCATTA CACCGATAAA GATAGAGGAC
CACGTCATAG AAAGTGACGA GATCTACAAT CTTGTGACCT TTATGTTGCT TTATACGTTG
ATCCTTATCG TATCATCATT CATTTTCATG CTTTACGGAA CGAATATGAG TAGTTCCGTG
TTCGAGGTAT CGAGTGCTTT GAGCACTGTG GGACTTTCCG CAGGAGCAAC CAGTGCGTCA
ATGCCTGTTG TCCTTAAGTT AGTGCTAATA ATTGACATGT TGTTTGGAAG GATAGAGATA
ATTCCATTGA TATTGCTATT CATGCCGGGA ACGTGGATAA AAAGAAAATG GGCAAATAAG
AGGAATGTGA AAACATGA
 
Protein sequence
MYELHTPVNH KAVAKYIGYY LIAFTFVLVV PTIAALVLGN VDAAIDYGST AVAVFIIGSL 
IYRALPDYDL ETKEALIIVA LVFPISAFLS AVPMSLTTGM PFIDAYFESV SAVTTTGLSV
APADVGPVFL FARSWGQWVG GIGIILVVLS VLIRPGTTAS RMYKANYGDM KIKPTVISTT
RTLGKVYIII TLISLILLLM SGMSLFDSIC HALSCVSTGG FSTRPEGIRA YQGSLIPTAI
SISCLLGAVS FVLYPHLFKK PEKIFKNLEL RYFLAFIAIG SIVFAFTLER GNTDYDLIQD
SLFQIINAIT TAGFSTIDLS ILSEASKAVL IFMMWIGGNV GSTAGGIKVL KVILLLKVVH
NVLLRLFLPR ETITPIKIED HVIESDEIYN LVTFMLLYTL ILIVSSFIFM LYGTNMSSSV
FEVSSALSTV GLSAGATSAS MPVVLKLVLI IDMLFGRIEI IPLILLFMPG TWIKRKWANK
RNVKT