| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0526 |
|---|
| Symbol | |
|---|
| ID | 3998628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 526405 |
|---|
| End bp | 528342 |
|---|
| Gene Length | 1938 bp |
|---|
| Protein Length | 645 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637958337 |
|---|
| Product | glycoside hydrolase 15-related |
|---|
| Protein accession | YP_565257 |
|---|
| Protein GI | 91772565 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAAC CACTCGTTGT TGGAAACGGA TCACTGCTGG TGAATCTTGA TATGAATGCA
AGCATCCGGG ACATGTACTT CCCCCATATA GGAAATGAGA ACCATGTGAA CGGGCGACAT
TGTAGAATAG GGGTAGAAGT AGATGGGAAA AATCTTGGTA TGGTCTCTCT GATCGGGGAT
GATTGGATCC ACAAACTTGG TTACCAGAAA GATCGGTTGG TAACTGATAG CTACTATCGC
AATGATCATC TTGAAGTTGA GTTGAGGTTC AACGAATGTG TACACCCTCA TGAGAATGTA
TTCATTCGAA AGATAGCAAT AACCAATACC AACACTATAG ATGTGGACAT GAAGCTACTT
TTCAGCCATG ATATTGCCCT TTACGAGAAC CCGAATGGTG ATACGGCTAT CTTTGACCCT
GCATTGCAAT CCATAATACA TTATCAGGAC TCGCGCTACT TCCTTATTAG TGGTTCACCA
TACTTTGACC AGTATGAAGT AGGTCCAAAA GGGACTGATG AATCTGGTGC TATCAAGTCT
GGAGGGCTTA ACATGAATTC CATTCAGGTT GGGGCAGTGA AAAGTTTAAT AAGTTTCTCC
CAGCATCTGG CAGCGGGAGA AACAAAAATA ATATATTACT GGATCGCAGC AGGGAAAACT
TTCTTTGAAG TCAAGCGGCT CAACGAACTT GTCCTTACTA CAACACCTGA AAGGATGATG
AGTGAAGCAG GGCAGTACTA TTATTCATGG GTGAACAAGG AAAAGTACGA TTTGTTTGAT
TTTCCACCAA AAGTGGTAGA CTTATTCAAA CACAGTCTGC TTATTATAAA GTCGCAGATC
GATTACGATG GCGCGATCAT AGCTGCCAAT GACAGTGATA TCCTTGAAAG GTTCAACATG
GATTCATACA GTTATATGTG GCCGCGTGAT AGTGCATATA TCGCCATGGC ACTGGACATA
ACACGTTACT CCGGAACTGT ACAGAAATTC TTTGAATACT GCCAGGGACT TATCCATGAA
AACGGGTATT TCCTGCAAAA ATACAATCCC ACAGGTACCC TTGCAAGTGG TTGGATGCCT
TGGCTAACAC CTGAGGGAAA GATCCAACTT CCGATACAGG AAGATAGTAC AGCACTTATT
ATCGTGGCTT TGTGGAATCA TTATAAAATT ACAAAATCTA TCGAGAACAT CGATCCGGTT
TATCACTCAC TGATAATACC GGCTGCCGAG TTCATGATCA AGTATAGGGA TCCTTCTACT
GGACTCCCAA AACCCAGTTA TAATCTGTGG GAGGACAAAA GAGCGGTTCA CAGCTATACA
TGTTCGACAG TGTATGCGGG ACTCATATGC GCTGCCAACT TTGCAGCAAT GTATGGAGAC
AATGACCTCG CAGAGAGCTA TAACACGGCT GCCATGGAAA TAAAAAAGGG GATCGAGAAT
CACCTGTATG ATAAGGAACT GGGAAGGTTC CTGCGAAGCA TCAGCCCGAG GGATGAAACC
GTAGATGCCA GTCTCTACGC CGTATCTCAG TTCGGGGTGC TCCCCCCCGA CGATGCCAGA
GTGGTTAGCA CTATGAAAAG TGTAGAAAGC ATACTGTCAG TGAAGACTGA GGTAGGAGGC
ATCGCTCGCT TCTATAAGGA TAAATATCAA GAAGTTGCAC AATACGATCC GGAGATCATT
CCAGGCAATC CCTGGTTCAT ATGTACCTTA TGGGTAGCGC AGTGGCATAT ACAGATGGCA
AAGAGCATCG ACGACTTGCA AAAAACAAGG GAGATAATAC TATGGACCAC AGAGAGGGCT
ACAGAAACCG GGATGTTGGC AGAACAGCTG AATCCATTTG ATGGGAGTCC TTTAAGCGTA
AGTCCTCTTA CTTGGGCACA TGCCACTTTT GTACTAACTG TCATGGCCTT TGTCGAGAAA
GCAAGATCAC TGGAGTAA
|
|---|
| Protein sequence | MPKPLVVGNG SLLVNLDMNA SIRDMYFPHI GNENHVNGRH CRIGVEVDGK NLGMVSLIGD
DWIHKLGYQK DRLVTDSYYR NDHLEVELRF NECVHPHENV FIRKIAITNT NTIDVDMKLL
FSHDIALYEN PNGDTAIFDP ALQSIIHYQD SRYFLISGSP YFDQYEVGPK GTDESGAIKS
GGLNMNSIQV GAVKSLISFS QHLAAGETKI IYYWIAAGKT FFEVKRLNEL VLTTTPERMM
SEAGQYYYSW VNKEKYDLFD FPPKVVDLFK HSLLIIKSQI DYDGAIIAAN DSDILERFNM
DSYSYMWPRD SAYIAMALDI TRYSGTVQKF FEYCQGLIHE NGYFLQKYNP TGTLASGWMP
WLTPEGKIQL PIQEDSTALI IVALWNHYKI TKSIENIDPV YHSLIIPAAE FMIKYRDPST
GLPKPSYNLW EDKRAVHSYT CSTVYAGLIC AANFAAMYGD NDLAESYNTA AMEIKKGIEN
HLYDKELGRF LRSISPRDET VDASLYAVSQ FGVLPPDDAR VVSTMKSVES ILSVKTEVGG
IARFYKDKYQ EVAQYDPEII PGNPWFICTL WVAQWHIQMA KSIDDLQKTR EIILWTTERA
TETGMLAEQL NPFDGSPLSV SPLTWAHATF VLTVMAFVEK ARSLE
|
|---|
| |