| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0509 |
|---|
| Symbol | |
|---|
| ID | 3997497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | - |
|---|
| Start bp | 506614 |
|---|
| End bp | 509370 |
|---|
| Gene Length | 2757 bp |
|---|
| Protein Length | 918 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637958321 |
|---|
| Product | type III restriction enzyme, res subunit |
|---|
| Protein accession | YP_565241 |
|---|
| Protein GI | 91772549 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG4096] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATA ATCAGAATCC GGAACAGAAA GCCAGGGATA GTATCGATAA GAAACTCACA
GATTCTGGCT GGAAAGTTTT GAATAAAAAT GAGGTTGATT GGAATGCTTC CCGTGGCATT
GCTGTTAAGG AGTATTCGAC CGAGGTGGGA CCGGCTGATT ATGTACTTTT TGTTAACAAA
AGACCTGTTG GTATCATTGA AGCTAAAAAG AATGAGGAAG GTCACCATCT GACCGTTGTT
GAAGAGCAGG CAGGTGAATA TGCTACGAGC AAACTGAAAT ACCTGAAAAA TGATCCGCTT
CCTTTTATTT ATGAGAGTAC TGGAAAGCTG ACCAGATATA CTGACCAGCG TGATCCTAAA
CCACGGTCCA GACAAGTTTT CTCTTTCCAT CGGCCGGAGA CATTCGCTCC CTATCTTAAA
AAGGAGATTT CATTAAGGGA AAGGTTACTT TCTCTACCTG AATTGAAGAC CGAGGGTCTG
CGTGATTGCC AGATAATGGC AATTGAAAAT CTGGAGAGGT CCTTCAAGGA CAATCGACCA
AAGGCTTTGG TACAGATGGC GACAGGTTCC GGGAAAACCT ATACTGCTGT CACTTTCATT
TACCGCTTGC TAAAATATGC GGATGCTAAA AAGATACTGT TCCTTGTTGA TACCAGAAAT
CTGGGGGAGC AGGCAGAGCA GGAATTCATG GCCTATATGC CAAATGACGA TAATCGTAAA
TTCACTGAGC TGTATAATGT GCAGCGTTTA CGTTCAAATT ATATCTCTTC GGACAGTCAG
GTGTGTATTT CCACCATCCA GCATTTGTAT TCCATCCTTA AGGGTGAGGA GCTGGACGAT
GAAGCCGAAA CGCAGAATCC TGCTGAGAAG GACTGGCAGA AAAAGGAACC GCTTCCGGTT
GTCTATAATG AGAATATTCC TATTGAGGAG TTTGATTTTA TTGTGGTTGA TGAGTGCCAC
CGTTCCATCT ACAACTTGTG GCAGCAGTTC ATTGATTATT TCGATTCGTT CCTTATCGGC
CTGACAGCGA CCCCGGATAA GCGTACCTTT GGTTTTTTCA ATGAGAATGT GGTTAGCGAG
TACGGTCATG AAGAAGCGGT GGCCGATGGC GTGAATGTCG GCTATGATGT GTACACCATT
GAGACCGAGA TAACTAAGAA CGGTTCTCAG ATCAAAGCCA AAGAGTTTGT GGACAGGCGG
GAGAAGCTTA CCCGCAGGAA GCGCTGGGAA CAGCTTGATG AGGATTATAC ATATGCTGGC
AATAAGCTTG ACAGGGATGT TGTCAACCCA AGCCAGATAC GAAATGTGGT CAGGACCTTC
AGGGATAAGC TGCCTGAGAT ATTCCCGGGA AGAGAGGAGG TTCCAAAGAC ACTGATCTTT
GCCAAGACCG ATAGCCATGC GGATGATATT ATACAGATCG TGCGGGAAGA GTTCGGGGAA
GGTAATGCTT TTTGCAAGAA GGTGACCTAC AAGGTCGAGG AAGACCCGAA GTCGGTGCTG
TCGCAGTTCC GTAATGATTA CAATCCAAGA ATTGCTGTGA CGGTGGATAT GATAGCTACC
GGTACGGATG TTAAGCCGCT GGAATGTTTG TTGTTCATGA GGGATGTGAA AAGCCGGAAC
TATTTCGAGC AGATGAAGGG TAGAGGCACG CGGACCATGG GTTTCGATGA CCTTAAAAAA
GTGACACCAT CGACAATTTC GGCCAAGACG CATTTTGTGA TAGTGGATGC CGTGGGCGTT
ACAAAGAACA TCAAGACCGA CAGCAGACCG CTGGAGCGCA AAAAAGGAAT TTCCCTGAAG
GCCCTGCTGG AAGCGGTAAC GTTTGGTGCT CAGGATGAAG ACCTTTATAT TTCACTTGCA
AGCCGTTTGG CAAGGCTGAA CAAACAGATC ACCGAGGATG AGAGGGCAAC TTTTGCTGAA
AAGGCCAACG GAAAGGATAT CAGTGCGGCT ATAAGGGACT TGTTCAGTGC CTACAATCCT
GACATAATCG ATGCCAGAGC TGCCGGTATA AAGCAGCAGC AACCCCAGAT GCCTGAACAG
GAGTTACAGG AGCAGGCACA ACAGGAACTG ATCGATGTTG CCAGATCGAC CTTTTCAGGA
GAGCTTAACG AGTATATCGA GAATGTACGC AGGGTGCATG ACCAGATAAT CGATACGGTG
AATCTCGATA CAGTTCTCAG GGCCGAGTGG GACAAGGACG CCGTTGTAAA AGCAGATGAG
CTTATCAGTG ATTTCAAAGC CTATATGGAA GCCAACAAGG ATGAGATCAC AGCCCTCAAC
ATCTTCTACA ACCAGCCCTA CCAGCGCAGG GATGTGACCT TCAAAATGAT TAAGGAAGTG
CTGGAGAAAC TAAAGCTGGA AAGACCCCAC ATCGCACCCT CAAGGGTCTG GCAGGCCTAC
GAGCAACTGG AAAAGGTCAG CGGCAACTCC CCCAAGAACG AGCTTACAGC CCTCGTATCC
CTTATCCGCA GGGTTACCGA GATCGACCCC GTTCTCACAG CCTACGACCT GACCGTGAAC
AGGAACTTCC AGGACTGGGT ATTCAGCAAA CAGGCCGGAA CCCTCAAGTT CAATGAAGAC
CAGATGAACT GGCTCCGAAT GATAAAGGAT TACGTATCCA CCAGTTTCCA CCTGGAACTC
GAAGACCTCG ATTACACCCC TTTCGATGCT ATGGGAGGCC GTGGCAGGAT GTACCAGCTT
TTTGGTAATG AGATGAATGT GGTTATTAGT GAATTGAATG AGGCATTGGC GGCGTGA
|
|---|
| Protein sequence | MSDNQNPEQK ARDSIDKKLT DSGWKVLNKN EVDWNASRGI AVKEYSTEVG PADYVLFVNK
RPVGIIEAKK NEEGHHLTVV EEQAGEYATS KLKYLKNDPL PFIYESTGKL TRYTDQRDPK
PRSRQVFSFH RPETFAPYLK KEISLRERLL SLPELKTEGL RDCQIMAIEN LERSFKDNRP
KALVQMATGS GKTYTAVTFI YRLLKYADAK KILFLVDTRN LGEQAEQEFM AYMPNDDNRK
FTELYNVQRL RSNYISSDSQ VCISTIQHLY SILKGEELDD EAETQNPAEK DWQKKEPLPV
VYNENIPIEE FDFIVVDECH RSIYNLWQQF IDYFDSFLIG LTATPDKRTF GFFNENVVSE
YGHEEAVADG VNVGYDVYTI ETEITKNGSQ IKAKEFVDRR EKLTRRKRWE QLDEDYTYAG
NKLDRDVVNP SQIRNVVRTF RDKLPEIFPG REEVPKTLIF AKTDSHADDI IQIVREEFGE
GNAFCKKVTY KVEEDPKSVL SQFRNDYNPR IAVTVDMIAT GTDVKPLECL LFMRDVKSRN
YFEQMKGRGT RTMGFDDLKK VTPSTISAKT HFVIVDAVGV TKNIKTDSRP LERKKGISLK
ALLEAVTFGA QDEDLYISLA SRLARLNKQI TEDERATFAE KANGKDISAA IRDLFSAYNP
DIIDARAAGI KQQQPQMPEQ ELQEQAQQEL IDVARSTFSG ELNEYIENVR RVHDQIIDTV
NLDTVLRAEW DKDAVVKADE LISDFKAYME ANKDEITALN IFYNQPYQRR DVTFKMIKEV
LEKLKLERPH IAPSRVWQAY EQLEKVSGNS PKNELTALVS LIRRVTEIDP VLTAYDLTVN
RNFQDWVFSK QAGTLKFNED QMNWLRMIKD YVSTSFHLEL EDLDYTPFDA MGGRGRMYQL
FGNEMNVVIS ELNEALAA
|
|---|
| |