| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0488 |
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| Symbol | |
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| ID | 3998326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | - |
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| Start bp | 482367 |
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| End bp | 483497 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637958301 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_565221 |
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| Protein GI | 91772529 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00399049 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATCCA AAAGGTTATT CGACAGAATC GATTCGATAA AACTTCGCGG TGTGACGAAG
AAATATGATG ACAGGTTTGC TATCAATGAT GTTTCTATTG ATATTGAAGG TGGGGAGCTG
GTCATTTTCA TAGGCCCCAG TGGGTCCGGG AAGACCACAA CACTGCGTAT GATCAATCGT
TTGATAGAAC CCGATTCAGG GACTATTCTC ATCAATGACC AGAATGTCAT GGAACTTGAG
CCGGTTGCCC TTCGCAGGAA CATAGGTTAT GTTATACAGA GTATCGGTCT TTTCCCTCAC
ATGACCATTG CCGAGAATAT TGGTCTCGTG GCCAAACTGG AAGGCTGGAA TGAGAAAAAG
ATCAAAGACA GGGTAGAATA CCTCCTTGAT TTTGTTTCCC TTCCGTCTGA GATGTTCATG
GATAGGTATC CTCATCAACT AAGCGGTGGA CAACAGCAAA GAGTTGGACT CGCAAGGGCA
CTTTTGATGG ACCCTCCCCT TTTGCTCATG GACGAACCCT TCGGTGCACT TGACCCGATC
TTAAGGAAAC AACTTCAGGA AGAGTTCTAC CAGATAAGGG AAAAACTGGG TAAGACCATA
ATATTCGTGA CACACGATAT CGAAGAAGCT TTCAAGCTCG GTGACAGGAT CGCAATAATG
GATAATGCGA AACTTGTTCA GATAGGCACA GCTGAAGAAT TGATATTTCA TCCCGCAAAC
GAAATGGTGG CAAGCATTGT AGATTCCGGT AAGAAGTTCA AGCACCTTGA TACGTTGAAA
ATAAAGGACC TCATATCCCC CCTTGAATGC ATGTATGTCC ACAATGGATC ACTTGACATC
GAGAGTGCTA TCAGTTCCAT GATAGAGAAG AACATCGAGA TCGCTGTGGT TTCTAATGGT
TCGGGTCCGC TGGGTATTGT AAAGCTTATT GATCTATTGC GTATGGATGA TAAGGACAGC
AAGATTGCAG ATCATGTTGT TGAGATCCCT TCATTTTCCA GAAATGAACT GCTCTCATCC
TCACTGAAAA TAATGCAGAA GAATGGTCAT TCGATGGCCT TTGTCATGAC CGATGAAGAA
CTAAGCGGAT TCCTGTTTCC AAATGATGCT TTCAGTCAGG TAATTGGATA A
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| Protein sequence | MPSKRLFDRI DSIKLRGVTK KYDDRFAIND VSIDIEGGEL VIFIGPSGSG KTTTLRMINR
LIEPDSGTIL INDQNVMELE PVALRRNIGY VIQSIGLFPH MTIAENIGLV AKLEGWNEKK
IKDRVEYLLD FVSLPSEMFM DRYPHQLSGG QQQRVGLARA LLMDPPLLLM DEPFGALDPI
LRKQLQEEFY QIREKLGKTI IFVTHDIEEA FKLGDRIAIM DNAKLVQIGT AEELIFHPAN
EMVASIVDSG KKFKHLDTLK IKDLISPLEC MYVHNGSLDI ESAISSMIEK NIEIAVVSNG
SGPLGIVKLI DLLRMDDKDS KIADHVVEIP SFSRNELLSS SLKIMQKNGH SMAFVMTDEE
LSGFLFPNDA FSQVIG
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