Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_0476 |
Symbol | |
ID | 3998314 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | + |
Start bp | 468945 |
End bp | 469784 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637958291 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_565211 |
Protein GI | 91772519 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.139506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGATCATTT CTGAAATATC GGATTTATTT TTTGCGAGTG GTGCATTAAT TATTAATACC GTCACTGCTG CTGTGGTCTT AATGCTTTCT GTATTTATAG GTAAAATACT GGCATTATAC CTGAGAAGGT CACTCAAGGA AAAAATGGAT AAAAGCCATC TGGTCATTAT TCTAAATGCG TCATACTATG GCATAGTCGC AATAACTTTC GTATTTATCA TTCTCCCAAT TCTGGGAGTT GAAACCTCAA GTCTGCTGGT TGCAGGTAGT ATATTTGGAC TGGTAATAGG TTTTGCCAGC CAGAGCATAG TTGGCAACCT TATTTCTGGC CTATTCCTGA TCTTCGAGAG ACCAATAAAG CTGGGCAATC AGGTAAATAT CGATGGGAAT GTGGGGATTG TAGAAGATAT CAGCCTGATC TCAACCATAA TCAGGACCTA TGATGGACTC TATGTAAGAA TTCCGAATGA GAACGTATTC ACAACCACAA TAACAAACTA TGTGGCTAAT GTTGCAAGAA GGTTTGAGTA TGTCGTTGGA GTAAGATACA GTGATGATGC CGATCAGGCC ATAGGCATAA TCAAGAACCT TATAGAAGAG CATTCTTTTG CTCTGAAGAA CCCGGAACCG GTTGTTTTTG TTGGTGAACT TGGGAACAAT TCAGTTAATA TCACTGTGAA GATATGGGCA CCTTCAACAG ACTGGTATGC TCTTAAAACA GAACTTCTCT GGAAGATAAA AAAGACCCTA GAAGAGAATG GAATTGAGAT CGCCTTCCCA CAGCGTGTGG TTTGGTTTGC CAATGAATCA AAGGATCAGC AGATTGCTGA TCCTGAGTAA
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Protein sequence | MIISEISDLF FASGALIINT VTAAVVLMLS VFIGKILALY LRRSLKEKMD KSHLVIILNA SYYGIVAITF VFIILPILGV ETSSLLVAGS IFGLVIGFAS QSIVGNLISG LFLIFERPIK LGNQVNIDGN VGIVEDISLI STIIRTYDGL YVRIPNENVF TTTITNYVAN VARRFEYVVG VRYSDDADQA IGIIKNLIEE HSFALKNPEP VVFVGELGNN SVNITVKIWA PSTDWYALKT ELLWKIKKTL EENGIEIAFP QRVVWFANES KDQQIADPE
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