Gene Mbur_0476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0476 
Symbol 
ID3998314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp468945 
End bp469784 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content40% 
IMG OID637958291 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_565211 
Protein GI91772519 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.139506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCATTT CTGAAATATC GGATTTATTT TTTGCGAGTG GTGCATTAAT TATTAATACC 
GTCACTGCTG CTGTGGTCTT AATGCTTTCT GTATTTATAG GTAAAATACT GGCATTATAC
CTGAGAAGGT CACTCAAGGA AAAAATGGAT AAAAGCCATC TGGTCATTAT TCTAAATGCG
TCATACTATG GCATAGTCGC AATAACTTTC GTATTTATCA TTCTCCCAAT TCTGGGAGTT
GAAACCTCAA GTCTGCTGGT TGCAGGTAGT ATATTTGGAC TGGTAATAGG TTTTGCCAGC
CAGAGCATAG TTGGCAACCT TATTTCTGGC CTATTCCTGA TCTTCGAGAG ACCAATAAAG
CTGGGCAATC AGGTAAATAT CGATGGGAAT GTGGGGATTG TAGAAGATAT CAGCCTGATC
TCAACCATAA TCAGGACCTA TGATGGACTC TATGTAAGAA TTCCGAATGA GAACGTATTC
ACAACCACAA TAACAAACTA TGTGGCTAAT GTTGCAAGAA GGTTTGAGTA TGTCGTTGGA
GTAAGATACA GTGATGATGC CGATCAGGCC ATAGGCATAA TCAAGAACCT TATAGAAGAG
CATTCTTTTG CTCTGAAGAA CCCGGAACCG GTTGTTTTTG TTGGTGAACT TGGGAACAAT
TCAGTTAATA TCACTGTGAA GATATGGGCA CCTTCAACAG ACTGGTATGC TCTTAAAACA
GAACTTCTCT GGAAGATAAA AAAGACCCTA GAAGAGAATG GAATTGAGAT CGCCTTCCCA
CAGCGTGTGG TTTGGTTTGC CAATGAATCA AAGGATCAGC AGATTGCTGA TCCTGAGTAA
 
Protein sequence
MIISEISDLF FASGALIINT VTAAVVLMLS VFIGKILALY LRRSLKEKMD KSHLVIILNA 
SYYGIVAITF VFIILPILGV ETSSLLVAGS IFGLVIGFAS QSIVGNLISG LFLIFERPIK
LGNQVNIDGN VGIVEDISLI STIIRTYDGL YVRIPNENVF TTTITNYVAN VARRFEYVVG
VRYSDDADQA IGIIKNLIEE HSFALKNPEP VVFVGELGNN SVNITVKIWA PSTDWYALKT
ELLWKIKKTL EENGIEIAFP QRVVWFANES KDQQIADPE