Gene Mbur_0450 details

Gene Information

• Locus tag: Mbur_0450
• Symbol: rnhB
• ID: 3997646
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 443348
• End bp: 443989
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637958267
• Product: ribonuclease HII
• Protein accession: YP_565187
• Protein GI: 91772495
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0164] Ribonuclease HII
• TIGRFAM ID: [TIGR00729] ribonuclease H, mammalian HI/archaeal HII subfamily

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 0.614438
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATAA TTGGAATTGA TGAAGCAGGG AAGGGTCCGG TCATCGGGCC GATGTGCATA 
GGCGGTGTGA GGATCGATGA GGATAAAAGC AATGCTCTGA AGAATCTGGG AGTTGCGGAT 
TCCAAGAAGC TTTCCCCAAA AAGGCGAGTA CATCTTGCCG CTCAGATAAA GAAATATGCA 
GATGGATGGT TCGTTTATGA GGTATCTCCT AATCAGATCG ATGAGCTTCG AAAACTGATG 
AGCATGAATG ATATTATGGT GCTTGCTTTT GGTTCGGTCA TTGAGGAACT TCCTTCTGAC 
AAGATCTATG CGGATGCAGC AGATGTGAAG GAGGAACGCT TTGGGAAGCG CCTTTTTGAC 
AATTACATGG AAAAGCATCC AGATGTATCA CCTCCGGAAG TTATCTCAAA ACATGGGGCA 
GACGATCTAT TTCCAGTTGT TTCAGCTGCA TCTATATTAG CAAAGGTCAG GCGTGATGAA 
CTTATAGAGA AGATAAAGGT GGACATGGGC GTGGATATCG GCAGTGGTTA TCCATCAGAT 
CCTAAGACCA AGAAGTTCCT TGAGAATTGG TACCGTGAGA ATAGCTCCTT TCCCGATATT 
GTAAGACATT CATGGAAAAC AGCACAGAAG TTCATTCAGT GA 

 

Protein sequence

MKIIGIDEAG KGPVIGPMCI GGVRIDEDKS NALKNLGVAD SKKLSPKRRV HLAAQIKKYA 
DGWFVYEVSP NQIDELRKLM SMNDIMVLAF GSVIEELPSD KIYADAADVK EERFGKRLFD 
NYMEKHPDVS PPEVISKHGA DDLFPVVSAA SILAKVRRDE LIEKIKVDMG VDIGSGYPSD 
PKTKKFLENW YRENSSFPDI VRHSWKTAQK FIQ