Gene Mbur_0408 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0408 
Symbol 
ID3997917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp390193 
End bp391326 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content38% 
IMG OID637958227 
ProductNa+/proline symporter-like protein 
Protein accessionYP_565148 
Protein GI91772456 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0591] Na+/proline symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGTAA ATACTTCAAC ACTTGGTATC TTCGTTCTTG TATATCTTCT CGCAGTATTT 
TACTGTGGCT GGTTGGCTTA CAAAAGGACG AAGGATGTAG AAGACTACAT GCTTGCCGGA
AGGAAGGTAA ATCCTTATAT TCTTGCTCTT TCCTATGGTG CTGCTTTCAT CAGTACAGCG
GCTATAATCG GGTTTGGAGG AGTGACGGGA ACACTTGGTC TTGGAACTCT CTGGCTTGTG
TTCATGAATA TCTTTGTGGG TATCTTTATA GCGTTCGTGG TATTTGGTGC AAGGACCAGA
AGGATAGGTT TGAACCTTGG TGCTGTAACT TTCCCTGAAC TTATCGGAAG GCGTTTCCAG
TCTCGTTTCA TTCAAGGCTA TTCTGGTGCT CTCATTGCTC TTTTTATGCC TCTTTATGCC
GGTATCGTCC TTATTGGCGG TGCAAGGTTC ATGGAAACCG CATTATGCAT GTCAAATATT
GCTTTTGCAG GAACAACTGA TACCGCATTA AATATAGAAG ATGGGACTAA AATTGCATCA
TTCTATACTA TGGAATTGGC AAATACATTC CCTGAACTTG CTTGTTGGGA AGGTTCGTCA
GTAGAACATG AAACTACGTA CTACAATTTT AACGGGGACA TAACTGCATA TACCTTTAAT
GTGGTTAAGA ATGATAGATA CCAGGAATAT ATTTTAGTTT CTGCAACAAA GGACAATTAT
CCAATACTTG AATTTTCAAA GGGCAAATTG CCACACATGG ATTCAGATAT TAAAGATGGA
ACACAAAGTC TTGTAACTGA TTATGCATCC GAAAATCGTT TATCTATCGA AAAAAGCACA
CCGATCTATG CGGGTGCAAC ATTCTATTAT GATAAATATG AAATGGTGGA CAGTAGAGAT
AAATCCGAAA AAACCATTTT AGTTGATCGT TTTTCAAAGA ATGTAATAGA TATAACTAAT
GCTAAACCAT TGGATAATGT GGAGAAAAAT ACCATACTTG AAAATGAAGA TATCCAAGAA
GCATGGACAA ATTTAGAGTA TAGTATGACT GACACCAAAT ATTCAGCATC ACCTATAGCT
ACAAGAAGTA GTCTTGGTTA TATATTCGAT GTTCCTTTGA AGCATGGTAC ATAA
 
Protein sequence
MAVNTSTLGI FVLVYLLAVF YCGWLAYKRT KDVEDYMLAG RKVNPYILAL SYGAAFISTA 
AIIGFGGVTG TLGLGTLWLV FMNIFVGIFI AFVVFGARTR RIGLNLGAVT FPELIGRRFQ
SRFIQGYSGA LIALFMPLYA GIVLIGGARF METALCMSNI AFAGTTDTAL NIEDGTKIAS
FYTMELANTF PELACWEGSS VEHETTYYNF NGDITAYTFN VVKNDRYQEY ILVSATKDNY
PILEFSKGKL PHMDSDIKDG TQSLVTDYAS ENRLSIEKST PIYAGATFYY DKYEMVDSRD
KSEKTILVDR FSKNVIDITN AKPLDNVEKN TILENEDIQE AWTNLEYSMT DTKYSASPIA
TRSSLGYIFD VPLKHGT