| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0369 |
|---|
| Symbol | |
|---|
| ID | 3997582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 349199 |
|---|
| End bp | 350425 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637958193 |
|---|
| Product | geranylgeranyl reductase |
|---|
| Protein accession | YP_565114 |
|---|
| Protein GI | 91772422 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins) |
|---|
| TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.0683691 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACC AATATGATCT AGTAGTTGTA GGTGCCGGCC CCGCAGGTTC GATCGCAGCG
ACAACCGCTG CTAAAAAAGG ACTCTCTGTC CTTATGCTCG AGAAGCGGCA GGAGATAGGG
GAACCTGTAA GATGTGCTGA AGGTGTTGGT AAAAAAAGGT TGAGACAGCA CATTGAACTT
GATGAGAAAT GGCTGTGTGG TGAGGTTAGT AGTGCCAAGA TTATTTCACC CAACGGTACA
ACCCTAACAA TGGCTGAGGA AGATGCCGGA TCTGAGGTTG GTTATGTCCT GGATCGTAAG
ATATTTGACC GTACCCTTGT GGAACTGAGT GGTGAAGCCG GTGTGGATAT CATGGTAAAG
GCAAGGGTTA CCGGTCTTAT CATTGAGGAA AATACTGTTT GTGGTGTTGA GATGATGCAT
CTTGGCAAGA CCTATTCAAT CCGCTCTAAG CTTGTCATCG GTGCCGATGG TGTAGAATCC
AAGGTGGGCA GATGGGCAGG TATTGACACG TCATTAAAAC CATCTCATAT TGAAACATGT
GCTCAGTTCC TTGTTAGTGG GGTTGATATT GACCAAAGCT CCTGTTATTT TTACATGGGC
AACAAAGTTG CACCTGGTGG GTATGTCTGG GTGTTCCCGA AAGGTAATAA CATGGCAAAT
GTGGGTATTG GTATTCTCGG CAGTCGTGCC GGAGAAAAGA AGCCCATTGA GTACCTGACC
GATTTCGTTG AGGCAAACTA TCCGAACGGC TCTATCATTG AGCAAGTTGC GGGTGCGGTT
CCTGCAAGTG GTCCCATCGA AAAGACCATT GCAAATGGTC TGATGCTTGT CGGGGATGCT
GCAAGGCAAT CTGATCCATT CACAGGTGGT GGCATTAGCA ATGCAATGGA TGCCGGGCTG
TATGCCGGTG AGGTTGCAGC CGAGGCTATT GCTCAGGATG ATGTGTCTGA AAAGATACTT
CAGAAATACG AAAAACGCTG GCGTGGGTCC TTTGGTAATG AAATTGCCAA TAATCTGATC
GTGAAGGAGA CTTTTTTCAG TCTTTCTGAT GAAGACCTTG ATTCACTTGC ACTATCGATA
AAGGATGTCG ATTTCAAGAA GATGGACCTG ATCGATTTCA TAGCAGCACT TTTCAAGGCT
AACAAGAAGC TTCTCTGGAA CTTGCGACCG TTGTTCACAC AGAAGTTAAA GCAGAAGTTC
TCTGGATTGA CAAAATTCAA AAGGTAA
|
|---|
| Protein sequence | MKDQYDLVVV GAGPAGSIAA TTAAKKGLSV LMLEKRQEIG EPVRCAEGVG KKRLRQHIEL
DEKWLCGEVS SAKIISPNGT TLTMAEEDAG SEVGYVLDRK IFDRTLVELS GEAGVDIMVK
ARVTGLIIEE NTVCGVEMMH LGKTYSIRSK LVIGADGVES KVGRWAGIDT SLKPSHIETC
AQFLVSGVDI DQSSCYFYMG NKVAPGGYVW VFPKGNNMAN VGIGILGSRA GEKKPIEYLT
DFVEANYPNG SIIEQVAGAV PASGPIEKTI ANGLMLVGDA ARQSDPFTGG GISNAMDAGL
YAGEVAAEAI AQDDVSEKIL QKYEKRWRGS FGNEIANNLI VKETFFSLSD EDLDSLALSI
KDVDFKKMDL IDFIAALFKA NKKLLWNLRP LFTQKLKQKF SGLTKFKR
|
|---|
| |