Gene Mbur_0363 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0363 
Symbol 
ID3997576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand+ 
Start bp343910 
End bp344572 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content41% 
IMG OID637958187 
Productchemoreceptor glutamine deamidase CheD 
Protein accessionYP_565108 
Protein GI229220840 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1871] Chemotaxis protein; stimulates methylation of MCP proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.3362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTGCG ATATCGCATT TGTCTCAACA GCAAGCGCAA AAGCGATTGT TTTGGGCAGA 
AATAAAACAG TAGTGGGTTC ATACTGTTCT ATGAATGGTA GATGTGCATA TGGCTCCTGT 
AATATGGGGT GTGAATTGAT CATGGAAGCC AAGAATCACT TAAATGGTAG TTCCATCGGT 
CCCAATGTGA AATTATTAGA AGGAGAATTA AGTGCCGGCA TTGGAGAATA CAAAATGGGG 
AAAGATGTCC TTTTAAAAGC AATGGGACTT GGTTCTTGCG TAGGGGTGGT GCTTTACGAC 
CAATCAACTC GTATGGCCGG TATTGCACAC GTGTTGCTTC CCGGAGCATC AAGCGACGGA 
AAGACCAAGC ATGCTGAAAC TGCTATAACA ACGATGCTTG AAGACATGGT AAGCAATGGA 
GCAAGACGAA GACATATTTG TGCAAAGTTT GCAGGTGGTG CCCAGATATT TAAGCATATG 
AGTCTGGACA TACTTAAGAT AGGGGATCGA AATATAAAAT CGGTTGAGGA AACCTTGGCA 
AAAGAGAAAA TAAAAATATT AGCCACAGAT GTAGGGGGAG ATATGGGGAG AAATGTTCTT 
TTCAATACGA TCGATGGAAG CTTAATTGTT AAGTATAGCA ATGGGGAGTT ATTATGGATG 
TAA
 
Protein sequence
MTCDIAFVST ASAKAIVLGR NKTVVGSYCS MNGRCAYGSC NMGCELIMEA KNHLNGSSIG 
PNVKLLEGEL SAGIGEYKMG KDVLLKAMGL GSCVGVVLYD QSTRMAGIAH VLLPGASSDG 
KTKHAETAIT TMLEDMVSNG ARRRHICAKF AGGAQIFKHM SLDILKIGDR NIKSVEETLA 
KEKIKILATD VGGDMGRNVL FNTIDGSLIV KYSNGELLWM