Gene Mbur_0356 details

Gene Information

• Locus tag: Mbur_0356
• ID: 3998720
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 335909
• End bp: 337867
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 637958180
• Product: chemotaxis sensory transducer
• Protein accession: YP_565101
• Protein GI: 91772409
• COG category: [N] Cell motility; [T] Signal transduction mechanisms
• COG ID: [COG0840] Methyl-accepting chemotaxis protein
• TIGRFAM ID: [TIGR00229] PAS domain S-box

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.656876
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTAACA AAGAAGCAAT TATAGAAAAT ACCACAACTG TGGAATCAGA CAGTAAAGAT 
GCAGCAAAAA TGGCAGAAGA GATTAGTTGG CTGATAGACA ATCTACCAGT CACGATTTTC 
AGATGTGACA TAAATGCATC ATGGGATATA TACTACATCA GCAAAAATGT ATATGATCTT 
ACAGGTCACC CCAAGACAGA TTTCCTTGGC AAAAAATTAA CATGGTCAGA TGTTGTTTTT 
CCTGAGGATG TGCCAAAAAT TGATGCGGCC ATTGATATAG CAATGAAGAA CAACGCACCA 
TACAAAGTTA ACTACAGAAT AAAAACTAAA AATGGAGATA CTGTTTACAT CCGGGAAGAA 
GGTAAACTGG TAAACGATGA CGAAGGAAAT GCAGCTTATC TGGATGGTGT ATTCCTGAAC 
ATTACAGAAA ATGTCATTGC AAAAGCAGAG TCCCAGAAAA CGATTGTAAA AAGTATACCC 
GAACCTGCAC TTGCTATATT TGTAGATCCT GAAGGCAAGG TCAAGCACAT AAACGATTAT 
TATGTTAAAC TGAGCCAATT CCAATCGGAT GAAGATGTCA TAGGAAGATC TCCCTCTGAA 
ATTATTGGGA AAACTACGTT GGTTGGAGAT AATTCAAACA TGAAATTGGG AGCCAGCCAA 
ACAATTGTTG AATCTGTTCT GGATACACGT GAAAGTGTGG AATCCTTAGA AGCAATTATA 
AAATTACATG GGCTGGACCA TGAACTCTAC ACAATAAGTT CTGCTTCACC TATATTTGAT 
GAAGAAGGGG TTTTTGAAGG AATACTGGAA GTTCTTACTG ATCTGACAGA TATCAAGCAG 
AAAGAAAAAG AAGTAAATGA ATTGCTTGAT TACACTAATG ACTGTCTTTC AGCCCTTGGA 
AATGGAATCA AAATGGTCGG TGAGGGAAAC CTCAATGTCA AGCTTGAAAA GATCAAAGAC 
GATGATTTCG GGAAGACCTT TGACGAATTC AATGGGTTTG TAGAGAACCT AAACAAAATA 
GTTCAAGCCA CGATGAGGGA CATGAATGCA ACATTGGATG AGGTGAAACA GTCCACTGAA 
GCTGTCAACC AGATGAATAC GGGTATGGAA CAAATATCAA CTGCTGCAGA ACAGATTGCA 
ACAGGGTCTG AAAATCTTTC AAGGCATGCC AATACTGCGG CATTGGATGT AAAGGCATCT 
GAGCAGATAT TCAAGGAATT AAGTGAAGCA GCAACAAAAT CTGCAAGTTT CTCTGCTCAA 
GCAGTAGAGA TGAGCGATGG AAGTCAAAAA CTCGCGAACA GTGCACTGAA AGACCTCGAA 
GTGATCATGA ATGAAATCGA GCAACTCGCA GGAATTGTCA CATCTCTTGA TGGTGCTGTT 
GATAATATCG ACAAGGTTAC TGATAAGATC AAATCCATTG CCGACCAGAC AAACCTCCTG 
GCTTTGAATG CAGCAATTGA AGCAGCAAGA GCAGGAGAAC ACGGAAGAGG GTTTGCTGTT 
GTGGCAGATG AGGTAAGGAA ACTTGCTGAG GAGTCAAGAA GCAGCACAGC TGAGATCAAT 
GGAATTGTGG TTAATGTCCA GAAAGAGACT AAAAAGGTCA CAGAAGCAAT CGAAAGGGCC 
AAAGAACAAG TAATTAGTGG AAACAAGGAT ATTGGAGGCG CACTAGGCAA GTCCGGTGAG 
ATCACAGGGA TGGTCGACAA GATCAATTCG ATGCTCGGTT CATTAAACAA GAAAGCTGAA 
GAGGGCATGG AGAAGATCGA GAGTATTAAT GAGAATATCG GGGAAGTAGC TTCAACAGCA 
GAAGAAAATG CTGCAAACAG CGAGGAAACT TCAGCAGCGA TCGAAGAACA GACTGCAGCA 
TCAGAGCAGG TAAGTGGCTC CATAAAGAAT GTTAACGATC TAGCTCAGAA GACAACGGAT 
ATGCTCATGA AAAATTTCCA ATTTTCAGAG AACAAATGA 

 

Protein sequence

MGNKEAIIEN TTTVESDSKD AAKMAEEISW LIDNLPVTIF RCDINASWDI YYISKNVYDL 
TGHPKTDFLG KKLTWSDVVF PEDVPKIDAA IDIAMKNNAP YKVNYRIKTK NGDTVYIREE 
GKLVNDDEGN AAYLDGVFLN ITENVIAKAE SQKTIVKSIP EPALAIFVDP EGKVKHINDY 
YVKLSQFQSD EDVIGRSPSE IIGKTTLVGD NSNMKLGASQ TIVESVLDTR ESVESLEAII 
KLHGLDHELY TISSASPIFD EEGVFEGILE VLTDLTDIKQ KEKEVNELLD YTNDCLSALG 
NGIKMVGEGN LNVKLEKIKD DDFGKTFDEF NGFVENLNKI VQATMRDMNA TLDEVKQSTE 
AVNQMNTGME QISTAAEQIA TGSENLSRHA NTAALDVKAS EQIFKELSEA ATKSASFSAQ 
AVEMSDGSQK LANSALKDLE VIMNEIEQLA GIVTSLDGAV DNIDKVTDKI KSIADQTNLL 
ALNAAIEAAR AGEHGRGFAV VADEVRKLAE ESRSSTAEIN GIVVNVQKET KKVTEAIERA 
KEQVISGNKD IGGALGKSGE ITGMVDKINS MLGSLNKKAE EGMEKIESIN ENIGEVASTA 
EENAANSEET SAAIEEQTAA SEQVSGSIKN VNDLAQKTTD MLMKNFQFSE NK