Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_0352 |
Symbol | |
ID | 3998716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | + |
Start bp | 330546 |
End bp | 332378 |
Gene Length | 1833 bp |
Protein Length | 610 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 637958176 |
Product | type II secretion system protein E |
Protein accession | YP_565097 |
Protein GI | 91772405 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.540636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGGAT CTAAGGGCAT ACTTATAGAC GAGGAGTTTG AAAAGGGGTT AAAAGCTTGC TTTCCTTTCA AACCAAAAAA ATATGAGGGG CATGAGCATT CTGAAATAAA AAATTCGAGT CTATATAAGA TACTTTCTCC CGAAATGAAA AAAGAAGTTG AAAACAACCG TCATCTTTTG GAATATTTGC ATATATTACC GATCGATACG ATTGGAATTC CAAAATATGT TTCCAATCTT ACATCTAAAT ATGGTGATCT CGAAAAACCC AATTTAATAT ACAAAACTAG TGATAATACC TATGTACATA TTTATCCAAA CAAGAATGGT GTAAGGGATT ATTATATTCC GATAGAACCA ACCCTGCTCA TCGGTGTTGG TAATCTGCTA AAAGAATTGG AAATAAAAAT GCTGGATTAC CTCACGGGAA TTGAGTTTGA TCCGAATGAT GTCGAAGAGA AAACAAAAAT ATTGATCGAC GCTCTGGATG ATATTTGTGT AATTGGAGTA AAGGAACAAA ATGATGATTC TTTTACGAAT TTTAAAAATT CTCTTGAAGC AAAACTCTTT CCGGATAAAA GAAAAAATGA GGACGGACAC ATATATTTAT CCCAAGAAAA ATATTATGCC TTAAAATATC TTCTTCTTAG GGATAAGATC GCATTAGGTT TTCTCGCTCC ATATATATGT GACAGTAATA TTGAAGATAT CACCTGCAAC GGACTAGGGT CTATATTTCT GGAACACAAA GTGTTCGATG GTCTAAGAAG TGTCCTTGAG TTCACTGACA ATGATGTTCT CAACCACTTT ATAATCAAGC TTGCAGAAAG GATCGGTAAA CCTATTACTT TTAAAGATCC AATTGTGGAT GCCACACTTC CAGATGGTTC AAGGATTAAC ATTGTTTATG GAACCGATGT GAGCAAAAAT GGTAGTAACT TCACAATAAG GAAATTTAAT GATATTCCAT TCAGTATTCT TCAGGTAATC GATAGGGGTA CGATGGATTA TAAGGTCGCA GCTTATATCT GGATTCTTCT TTCTGAGGGG ATGAGTGGTT TTATCTGTGG TGAAACTGCA AGCGGTAAAA CAACTTCATT AAATGCCCTT ACAACTTTTA TAAGTCCTGA TGCAAAATTG GTTTCTATAG AAGATACTCC TGAATTACAG ATCCCTCATA AAAATTGGAC ACGTGAGGTG ACTCGTGGTA GCACAAGAGG TGGTGGTGTT GGCGAAGGGA CTGGTTCGGA TGTTACGATG TTCGACCTTC TAAAAGCTGG CTTGAGGCAG AGACCAAATT ATATTCTTGT GGGTGAGATT AGAGGAGTCG AGGGAAATGT TGCCTTTCAG GCTATGCAGA CAGGTCACCC TGTTGTATCA ACCTTCCACG CTGCAAGTGT TGAAAAATTA ATACAGAGGA TCACTGCAGA ACCCATAAGC ATTCCCAAAA CATATGTTGA TAATTTGAAT TTTGTTATTA TTCAATCTGC TGTCAGACGG CCCGATGGGA AAATGGTGAG AAGGGTAATT AGCGTAAGTG AAGTTATTGG GTTTGATGCC CAAAAGGGTG TTTCTTTCAT AGAGTCATAT ACCTGGGATC CGATCACTGA TACTCATGTT TTCAATGCTC ACGGTAGTTC TTATCTTCTG GAACAAAAAA TTGCAACAAG GCTAGGAATT CCTGCAAATA AAAAGTATGT TGTTTATGAG GAAATAGAGA AAAGGGCTAA AATATTAGAA AGTTTTCAAG AAGAAGGTAT CACGAATTTC TATGATTTTT TTGATACGAT CTCTAAAATT ACAAAACATG GGTTACTGAG AATTAAATTC TAA
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Protein sequence | MAGSKGILID EEFEKGLKAC FPFKPKKYEG HEHSEIKNSS LYKILSPEMK KEVENNRHLL EYLHILPIDT IGIPKYVSNL TSKYGDLEKP NLIYKTSDNT YVHIYPNKNG VRDYYIPIEP TLLIGVGNLL KELEIKMLDY LTGIEFDPND VEEKTKILID ALDDICVIGV KEQNDDSFTN FKNSLEAKLF PDKRKNEDGH IYLSQEKYYA LKYLLLRDKI ALGFLAPYIC DSNIEDITCN GLGSIFLEHK VFDGLRSVLE FTDNDVLNHF IIKLAERIGK PITFKDPIVD ATLPDGSRIN IVYGTDVSKN GSNFTIRKFN DIPFSILQVI DRGTMDYKVA AYIWILLSEG MSGFICGETA SGKTTSLNAL TTFISPDAKL VSIEDTPELQ IPHKNWTREV TRGSTRGGGV GEGTGSDVTM FDLLKAGLRQ RPNYILVGEI RGVEGNVAFQ AMQTGHPVVS TFHAASVEKL IQRITAEPIS IPKTYVDNLN FVIIQSAVRR PDGKMVRRVI SVSEVIGFDA QKGVSFIESY TWDPITDTHV FNAHGSSYLL EQKIATRLGI PANKKYVVYE EIEKRAKILE SFQEEGITNF YDFFDTISKI TKHGLLRIKF
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