Gene Mbur_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0352 
Symbol 
ID3998716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp330546 
End bp332378 
Gene Length1833 bp 
Protein Length610 aa 
Translation table11 
GC content36% 
IMG OID637958176 
Producttype II secretion system protein E 
Protein accessionYP_565097 
Protein GI91772405 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.540636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGAT CTAAGGGCAT ACTTATAGAC GAGGAGTTTG AAAAGGGGTT AAAAGCTTGC 
TTTCCTTTCA AACCAAAAAA ATATGAGGGG CATGAGCATT CTGAAATAAA AAATTCGAGT
CTATATAAGA TACTTTCTCC CGAAATGAAA AAAGAAGTTG AAAACAACCG TCATCTTTTG
GAATATTTGC ATATATTACC GATCGATACG ATTGGAATTC CAAAATATGT TTCCAATCTT
ACATCTAAAT ATGGTGATCT CGAAAAACCC AATTTAATAT ACAAAACTAG TGATAATACC
TATGTACATA TTTATCCAAA CAAGAATGGT GTAAGGGATT ATTATATTCC GATAGAACCA
ACCCTGCTCA TCGGTGTTGG TAATCTGCTA AAAGAATTGG AAATAAAAAT GCTGGATTAC
CTCACGGGAA TTGAGTTTGA TCCGAATGAT GTCGAAGAGA AAACAAAAAT ATTGATCGAC
GCTCTGGATG ATATTTGTGT AATTGGAGTA AAGGAACAAA ATGATGATTC TTTTACGAAT
TTTAAAAATT CTCTTGAAGC AAAACTCTTT CCGGATAAAA GAAAAAATGA GGACGGACAC
ATATATTTAT CCCAAGAAAA ATATTATGCC TTAAAATATC TTCTTCTTAG GGATAAGATC
GCATTAGGTT TTCTCGCTCC ATATATATGT GACAGTAATA TTGAAGATAT CACCTGCAAC
GGACTAGGGT CTATATTTCT GGAACACAAA GTGTTCGATG GTCTAAGAAG TGTCCTTGAG
TTCACTGACA ATGATGTTCT CAACCACTTT ATAATCAAGC TTGCAGAAAG GATCGGTAAA
CCTATTACTT TTAAAGATCC AATTGTGGAT GCCACACTTC CAGATGGTTC AAGGATTAAC
ATTGTTTATG GAACCGATGT GAGCAAAAAT GGTAGTAACT TCACAATAAG GAAATTTAAT
GATATTCCAT TCAGTATTCT TCAGGTAATC GATAGGGGTA CGATGGATTA TAAGGTCGCA
GCTTATATCT GGATTCTTCT TTCTGAGGGG ATGAGTGGTT TTATCTGTGG TGAAACTGCA
AGCGGTAAAA CAACTTCATT AAATGCCCTT ACAACTTTTA TAAGTCCTGA TGCAAAATTG
GTTTCTATAG AAGATACTCC TGAATTACAG ATCCCTCATA AAAATTGGAC ACGTGAGGTG
ACTCGTGGTA GCACAAGAGG TGGTGGTGTT GGCGAAGGGA CTGGTTCGGA TGTTACGATG
TTCGACCTTC TAAAAGCTGG CTTGAGGCAG AGACCAAATT ATATTCTTGT GGGTGAGATT
AGAGGAGTCG AGGGAAATGT TGCCTTTCAG GCTATGCAGA CAGGTCACCC TGTTGTATCA
ACCTTCCACG CTGCAAGTGT TGAAAAATTA ATACAGAGGA TCACTGCAGA ACCCATAAGC
ATTCCCAAAA CATATGTTGA TAATTTGAAT TTTGTTATTA TTCAATCTGC TGTCAGACGG
CCCGATGGGA AAATGGTGAG AAGGGTAATT AGCGTAAGTG AAGTTATTGG GTTTGATGCC
CAAAAGGGTG TTTCTTTCAT AGAGTCATAT ACCTGGGATC CGATCACTGA TACTCATGTT
TTCAATGCTC ACGGTAGTTC TTATCTTCTG GAACAAAAAA TTGCAACAAG GCTAGGAATT
CCTGCAAATA AAAAGTATGT TGTTTATGAG GAAATAGAGA AAAGGGCTAA AATATTAGAA
AGTTTTCAAG AAGAAGGTAT CACGAATTTC TATGATTTTT TTGATACGAT CTCTAAAATT
ACAAAACATG GGTTACTGAG AATTAAATTC TAA
 
Protein sequence
MAGSKGILID EEFEKGLKAC FPFKPKKYEG HEHSEIKNSS LYKILSPEMK KEVENNRHLL 
EYLHILPIDT IGIPKYVSNL TSKYGDLEKP NLIYKTSDNT YVHIYPNKNG VRDYYIPIEP
TLLIGVGNLL KELEIKMLDY LTGIEFDPND VEEKTKILID ALDDICVIGV KEQNDDSFTN
FKNSLEAKLF PDKRKNEDGH IYLSQEKYYA LKYLLLRDKI ALGFLAPYIC DSNIEDITCN
GLGSIFLEHK VFDGLRSVLE FTDNDVLNHF IIKLAERIGK PITFKDPIVD ATLPDGSRIN
IVYGTDVSKN GSNFTIRKFN DIPFSILQVI DRGTMDYKVA AYIWILLSEG MSGFICGETA
SGKTTSLNAL TTFISPDAKL VSIEDTPELQ IPHKNWTREV TRGSTRGGGV GEGTGSDVTM
FDLLKAGLRQ RPNYILVGEI RGVEGNVAFQ AMQTGHPVVS TFHAASVEKL IQRITAEPIS
IPKTYVDNLN FVIIQSAVRR PDGKMVRRVI SVSEVIGFDA QKGVSFIESY TWDPITDTHV
FNAHGSSYLL EQKIATRLGI PANKKYVVYE EIEKRAKILE SFQEEGITNF YDFFDTISKI
TKHGLLRIKF