Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_0303 |
Symbol | |
ID | 3997119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | - |
Start bp | 276516 |
End bp | 277706 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637958133 |
Product | geranylgeranyl reductase |
Protein accession | YP_565055 |
Protein GI | 91772363 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.411579 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCCTG ATGAATCATA TGACATTATC ATTGTTGGTG CCGGACCTGC CGGTTCAACT GCTGCAGCCT ATGCTGCAAA AGCAGGTGCT TCTGTACTTC TCATTGAAAA GAAAAAGGAT ATAGGATTGC CACTTCAATG TGGTGGCTTC CTTCCTCATC TGGACACTTT ACAGGAGCTT GTACCAAATG CACAACTTCC TTATTTGCTT GAGGACATTC CTGCAGACTG CATTCACACT ACAAGCAGTG TACAACGTTT TATCGCTCCG AATGGATATT CCAAGGAGTT TGAGGTGGAT GCTGATGCCA TCGACAGACG GAGGTTCGAC AAATATCTTG CAAAGGAAGC AGGGCGTTGT GGTGCGGATG TAATGATAGG GACCAATGTT CTTGAGGTCA ACGGTACTTC TGTTGATGTA GATGGTGTTT TTGGGACACA TTCTATTAGT GGTAAAGTTC TCATTGGGGC GGATGGTCCG AATTCCACGG TTGGTAGGGC AAAGGGATTG GTGAGGGATC ATGATCCTAT GGGAACTGGT ACTGCTTTTG AGTATGAGGT AAGTTGTGTG GATATCGACC GTGAAGCTGT TGAGATGTAC TTTGGTAAAG ATTATGTGCC CGGTGGGTAT GCATGGATAA TCTCTCAGGG TGGGGATACT GCAAATATAG GCGTTGGTAT AAGGGAAGTG CTGTTCAGGA ACGGATTGTC TGCAAGGGAT TATCTTGAAA GGTTCATGTA TGAGCACCCG ATAGCAAGTC GAAAGCTTGA TGGAGCTTCT ATTATTTCAG TCGTATCCGG TCTTGTCCCG GTAGGTGGTG CTCCCAAAGT AACTGCTACA AAGGACACTC TTGTGGCCGG GGATGCAGCA GGTCACATAA TAGCGACCAA TGGAGGGGGG ATATCTACTG CAATGGTTGG GGGTAAGATC GCAGGTCAGA CTGCAGCTGA ATTCCTCGAG GGCAAGTGTG CTTTGCAGGA TTATGAGGAG CGCTGGAGGC GTGAGATGGG ACTCGAGATA AAAACAGCGG TCTATGTGCG AAAGCTCATG GATAATCTTA TGCGCTCCGA TTCCATGATG TCGGCTGCGA TCAAGATGAT CGACCCTGAG CATATGAAAG CTATGCAATG TGGACAGTTG CCGGATGTTG TTCGTAAAGG TCTCATCAAG ATGAACTTTG GGATAAAATG A
|
Protein sequence | MTPDESYDII IVGAGPAGST AAAYAAKAGA SVLLIEKKKD IGLPLQCGGF LPHLDTLQEL VPNAQLPYLL EDIPADCIHT TSSVQRFIAP NGYSKEFEVD ADAIDRRRFD KYLAKEAGRC GADVMIGTNV LEVNGTSVDV DGVFGTHSIS GKVLIGADGP NSTVGRAKGL VRDHDPMGTG TAFEYEVSCV DIDREAVEMY FGKDYVPGGY AWIISQGGDT ANIGVGIREV LFRNGLSARD YLERFMYEHP IASRKLDGAS IISVVSGLVP VGGAPKVTAT KDTLVAGDAA GHIIATNGGG ISTAMVGGKI AGQTAAEFLE GKCALQDYEE RWRREMGLEI KTAVYVRKLM DNLMRSDSMM SAAIKMIDPE HMKAMQCGQL PDVVRKGLIK MNFGIK
|
| |