Gene Mbur_0254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0254 
Symbol 
ID3998749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp228644 
End bp230608 
Gene Length1965 bp 
Protein Length654 aa 
Translation table11 
GC content40% 
IMG OID637958089 
Producttype II secretion system protein E 
Protein accessionYP_565011 
Protein GI91772319 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGAAA GTTCTGATAA TGAGTTCGAT GCAAAAAAAG ACGAAAAAGT ATCTGCGGAG 
AATATCGTAA TGAATGCAAT CGATGGGATG GATGACGGTT TGCCCTTGGA TAAATCTTCA
GAAGTAGGTA CAAGTGAACC TCCTGAAGAC ATATTATCAA ATATTGTAGA GATTGTGGAA
GCTGATTCTC AGACCGAGCT CCTTTCTCAA GAAGAGTTAG AGAGTGATAT TGGGGAATTA
CTCAATTTTA AGAAAAAAAA TATTGATAAA AGCACCAATT TATCAGGCGA GATTAGTTCT
GCATGGGAAA AGACCCTGAA AGAAATTGTT TCAGAGCACC CTATTCCAGA GGTTCTCCCC
CTTGAGATCA AACCTGAATC GTTCATCCAG AAGTTCTTGA ATATGGTTCG CGCCAAATCT
TTTGAAATGG ATGATTATGA TATTGCAATA CATGGTCCTC TTGTGGAAAT AACTCTCCCA
GAAGATTCTG TTTATGATGA AATTGAATTC TATAATGTGA ACCCGCCATA TTCTTACATT
AGGGTAGTTT ATAATCCCGA AATTCATGAA TATTTATATC AGGTACTTGA ACCTGAACTC
TCAGAAGAGG AAACAAAACT TTTCAAGATG GTAAAAGAAC GTCTTGGTGA AGTTATGGAT
ACTCATCTGA AAAGTATGAA CAGAATTGAT TCCGAAGAGT ATTTGAGGTC AAATGTTAAT
TCTTTCCTAC ACGATTACAG GATAAGAATC ACCACCATAA CTCGTGAAAA GATCAGTTAT
TTTATTATTC GTGATTACCT TGGCTACGGT GAAGTTGATG CTATTATGCG CGATCTGGAG
ATCGAGGATA TTTCGGGTGA TGGCCCTAAC ACGCCTGTCT ATGTTTATCA TAAAAAGTAC
GAATCTATAC CTTCAAATGT AATTTTTGAT GAGGAAGATG GATTAAATGC TTTGATCATA
AGGTTAGCTC AAATTTGTGG CAAACACATT TCCATTGCAA ATCCACTCTT AGATGCAACA
TTACCTGATG GTTCCCGTAT ACAGATGACT CTTGGAAGGG AGATTACTAC AAGGGGAAGT
ACGTTCACTA TTCGTAGATT CAATGAGAAT CCAATCACAC CTTCCGATCT TTTAAGCTAT
CATACATTTT CGAATGCAAT GCTGGCATAT CTATGGCTTG CTGTTGATTC AAGTAGGAGT
CTCATTTTCG CGGGTGGCAC TGCTTCAGGC AAGACCACAG CGATGAATGC TGTTTCTACT
TTTATTCAGC CTGAAATGAA AATTGTTTCG ATCGAAGATA CAAGAGAATT GAACCTTGCT
CACCCGAATT GGATACCTGG AGTCACACGT GAAGCGTTTG GAGGTGAAAA TAAAGGTTCT
ATTGAAATGT ATGAACTTTT AAAGGCTGCA CTTCGTCAGC GTCCAGAATT TATTCTTGTG
GGTGAAGTTA GGGGTGCTGA AGCATATGTG CTTTTCCAGG CGATGTCCAC AGGACACACA
ACATTTTCTA CCATGCATGC AGATTCCGTA CAATCAATCG TGCACAGGCT TGAGAATCCT
CCTATCAATG TTCCCAGGAT CATGATACAG GCACTTGATA TTGTGGCAAT TCAGGCACAG
GTGAAAGTTG GGGATGAGCG GGTAAGGAGG TGTAAATCGC TTACTGAGAT CATAGGGGTT
GATCCGAGAA CTGGTGAACT TCTAACGAAC GAGGTATTTG TATGGAACGC GTCAAAGGAC
TTATTCCAGT ATTCAGGTCG TTCCTACATT CTAGATGATC TAATGGATTC AAGAGGCTGG
GATGATGTTA AGGTCAAGGA AGAATTGCAG GAACGCCAAG ACGTCATTGA ATGGGCGCGC
TTGAAGAATA TCACCTACTT CAGAGACTTC TCTAAGATAG TGGTTGCGCA TAAGCGTGAG
CCTGAAACAT TAATGAAACT TGTAAGGCAG GATCTGAATG GATAA
 
Protein sequence
MIESSDNEFD AKKDEKVSAE NIVMNAIDGM DDGLPLDKSS EVGTSEPPED ILSNIVEIVE 
ADSQTELLSQ EELESDIGEL LNFKKKNIDK STNLSGEISS AWEKTLKEIV SEHPIPEVLP
LEIKPESFIQ KFLNMVRAKS FEMDDYDIAI HGPLVEITLP EDSVYDEIEF YNVNPPYSYI
RVVYNPEIHE YLYQVLEPEL SEEETKLFKM VKERLGEVMD THLKSMNRID SEEYLRSNVN
SFLHDYRIRI TTITREKISY FIIRDYLGYG EVDAIMRDLE IEDISGDGPN TPVYVYHKKY
ESIPSNVIFD EEDGLNALII RLAQICGKHI SIANPLLDAT LPDGSRIQMT LGREITTRGS
TFTIRRFNEN PITPSDLLSY HTFSNAMLAY LWLAVDSSRS LIFAGGTASG KTTAMNAVST
FIQPEMKIVS IEDTRELNLA HPNWIPGVTR EAFGGENKGS IEMYELLKAA LRQRPEFILV
GEVRGAEAYV LFQAMSTGHT TFSTMHADSV QSIVHRLENP PINVPRIMIQ ALDIVAIQAQ
VKVGDERVRR CKSLTEIIGV DPRTGELLTN EVFVWNASKD LFQYSGRSYI LDDLMDSRGW
DDVKVKEELQ ERQDVIEWAR LKNITYFRDF SKIVVAHKRE PETLMKLVRQ DLNG