Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_0254 |
Symbol | |
ID | 3998749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | - |
Start bp | 228644 |
End bp | 230608 |
Gene Length | 1965 bp |
Protein Length | 654 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637958089 |
Product | type II secretion system protein E |
Protein accession | YP_565011 |
Protein GI | 91772319 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAGAAA GTTCTGATAA TGAGTTCGAT GCAAAAAAAG ACGAAAAAGT ATCTGCGGAG AATATCGTAA TGAATGCAAT CGATGGGATG GATGACGGTT TGCCCTTGGA TAAATCTTCA GAAGTAGGTA CAAGTGAACC TCCTGAAGAC ATATTATCAA ATATTGTAGA GATTGTGGAA GCTGATTCTC AGACCGAGCT CCTTTCTCAA GAAGAGTTAG AGAGTGATAT TGGGGAATTA CTCAATTTTA AGAAAAAAAA TATTGATAAA AGCACCAATT TATCAGGCGA GATTAGTTCT GCATGGGAAA AGACCCTGAA AGAAATTGTT TCAGAGCACC CTATTCCAGA GGTTCTCCCC CTTGAGATCA AACCTGAATC GTTCATCCAG AAGTTCTTGA ATATGGTTCG CGCCAAATCT TTTGAAATGG ATGATTATGA TATTGCAATA CATGGTCCTC TTGTGGAAAT AACTCTCCCA GAAGATTCTG TTTATGATGA AATTGAATTC TATAATGTGA ACCCGCCATA TTCTTACATT AGGGTAGTTT ATAATCCCGA AATTCATGAA TATTTATATC AGGTACTTGA ACCTGAACTC TCAGAAGAGG AAACAAAACT TTTCAAGATG GTAAAAGAAC GTCTTGGTGA AGTTATGGAT ACTCATCTGA AAAGTATGAA CAGAATTGAT TCCGAAGAGT ATTTGAGGTC AAATGTTAAT TCTTTCCTAC ACGATTACAG GATAAGAATC ACCACCATAA CTCGTGAAAA GATCAGTTAT TTTATTATTC GTGATTACCT TGGCTACGGT GAAGTTGATG CTATTATGCG CGATCTGGAG ATCGAGGATA TTTCGGGTGA TGGCCCTAAC ACGCCTGTCT ATGTTTATCA TAAAAAGTAC GAATCTATAC CTTCAAATGT AATTTTTGAT GAGGAAGATG GATTAAATGC TTTGATCATA AGGTTAGCTC AAATTTGTGG CAAACACATT TCCATTGCAA ATCCACTCTT AGATGCAACA TTACCTGATG GTTCCCGTAT ACAGATGACT CTTGGAAGGG AGATTACTAC AAGGGGAAGT ACGTTCACTA TTCGTAGATT CAATGAGAAT CCAATCACAC CTTCCGATCT TTTAAGCTAT CATACATTTT CGAATGCAAT GCTGGCATAT CTATGGCTTG CTGTTGATTC AAGTAGGAGT CTCATTTTCG CGGGTGGCAC TGCTTCAGGC AAGACCACAG CGATGAATGC TGTTTCTACT TTTATTCAGC CTGAAATGAA AATTGTTTCG ATCGAAGATA CAAGAGAATT GAACCTTGCT CACCCGAATT GGATACCTGG AGTCACACGT GAAGCGTTTG GAGGTGAAAA TAAAGGTTCT ATTGAAATGT ATGAACTTTT AAAGGCTGCA CTTCGTCAGC GTCCAGAATT TATTCTTGTG GGTGAAGTTA GGGGTGCTGA AGCATATGTG CTTTTCCAGG CGATGTCCAC AGGACACACA ACATTTTCTA CCATGCATGC AGATTCCGTA CAATCAATCG TGCACAGGCT TGAGAATCCT CCTATCAATG TTCCCAGGAT CATGATACAG GCACTTGATA TTGTGGCAAT TCAGGCACAG GTGAAAGTTG GGGATGAGCG GGTAAGGAGG TGTAAATCGC TTACTGAGAT CATAGGGGTT GATCCGAGAA CTGGTGAACT TCTAACGAAC GAGGTATTTG TATGGAACGC GTCAAAGGAC TTATTCCAGT ATTCAGGTCG TTCCTACATT CTAGATGATC TAATGGATTC AAGAGGCTGG GATGATGTTA AGGTCAAGGA AGAATTGCAG GAACGCCAAG ACGTCATTGA ATGGGCGCGC TTGAAGAATA TCACCTACTT CAGAGACTTC TCTAAGATAG TGGTTGCGCA TAAGCGTGAG CCTGAAACAT TAATGAAACT TGTAAGGCAG GATCTGAATG GATAA
|
Protein sequence | MIESSDNEFD AKKDEKVSAE NIVMNAIDGM DDGLPLDKSS EVGTSEPPED ILSNIVEIVE ADSQTELLSQ EELESDIGEL LNFKKKNIDK STNLSGEISS AWEKTLKEIV SEHPIPEVLP LEIKPESFIQ KFLNMVRAKS FEMDDYDIAI HGPLVEITLP EDSVYDEIEF YNVNPPYSYI RVVYNPEIHE YLYQVLEPEL SEEETKLFKM VKERLGEVMD THLKSMNRID SEEYLRSNVN SFLHDYRIRI TTITREKISY FIIRDYLGYG EVDAIMRDLE IEDISGDGPN TPVYVYHKKY ESIPSNVIFD EEDGLNALII RLAQICGKHI SIANPLLDAT LPDGSRIQMT LGREITTRGS TFTIRRFNEN PITPSDLLSY HTFSNAMLAY LWLAVDSSRS LIFAGGTASG KTTAMNAVST FIQPEMKIVS IEDTRELNLA HPNWIPGVTR EAFGGENKGS IEMYELLKAA LRQRPEFILV GEVRGAEAYV LFQAMSTGHT TFSTMHADSV QSIVHRLENP PINVPRIMIQ ALDIVAIQAQ VKVGDERVRR CKSLTEIIGV DPRTGELLTN EVFVWNASKD LFQYSGRSYI LDDLMDSRGW DDVKVKEELQ ERQDVIEWAR LKNITYFRDF SKIVVAHKRE PETLMKLVRQ DLNG
|
| |