Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mbur_0225 |
Symbol | |
ID | 3997661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcoides burtonii DSM 6242 |
Kingdom | Archaea |
Replicon accession | NC_007955 |
Strand | + |
Start bp | 202102 |
End bp | 203346 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637958062 |
Product | TPR repeat-containing protein |
Protein accession | YP_564985 |
Protein GI | 91772293 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3063] Tfp pilus assembly protein PilF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGATG AAGGCGATCA TGCAGGGGCA TTGAATGCTT TTGAAACTGC TATTATGTAC CAGCCAAACG TTCCAGCTGC CTGGTATGGT AAAGGTGATT CTCATTTTTA TCTTGGTGAT TATGAAGCCG CTATTCAGGC GTATGATATG GCGCTACAGT ACGATCCGAA TCTTTTGAAT GCATATGCAG GCAAAGCTGA TTCATTAGCA AAGATCGGGA AGTCCGATGA AGCCAGGACT CTTTATGAAA AAGCAACTGC TATCGGGGCT GATGATGCAG AAATATGGTC TCGTAAAGGC AGTACTTTGT ATGGATTGGG ATATTATTCT GAATCGGTTA ATGCCTATGA TAAGGCCATT TCCCTGGATC CAACTAACAT ATTATCGTAT GTTGGCAAAG GCTATTCACT AATTGGAATT GCACAGTATT CCGATGCATT GGAGGCATTT GAAGAGGCTC TCGTATTTGA CAACGGGTAT TCTATATCAT GGGTTGGAAA AGGTGATTGC TATTATGGTC TTGGTGGCTA TGAAGCTGCA ATAAGTGCTT ATGATATGGC ATTATCAATA GATCCTACCT TTTCACCAGC ATGGTCCGGT AAAGGCTATT CTCTATATGA AATAGGTGAT CATGAGGGTG CAATTGTTGC ATTCGATACT GCTCTATTTC ACTCTCCTAA ATATGTAAAG GCATTAAGTG GAAAAGCTTT CACGCTTTTT GCACTCGAGG AATACGATCT ATCTCTTATT GCTTTCAATG AAACGATCGA TGCTGATGCT AGTTATGCAA AGGCATGGTC TGGTAAAGGT GATGTCCTTT CACAGATCGG GAAGGCAGAA CAGGCAACTG CTTCATACAG AATGTCCGTC CAACTTTACT CCGGGGATGC TGATGCTCTC TACAATCTTG GGCGTGAGCT TTTTGAAATG GGACTTTTTA GTGAAGCCCT TGAAGCGTTC GAAGCTTCGT TGAACGTAAA CTCTGAGAAC TTATTTGCTC TTGTAGGTAA AGGTTATGCC TTATATGAAT TAGGTGATTA TAAGGGTGCA TCTGTGGCCT TTGATCAAGC AATTGCTGTC CAGCCAGGGT ATGAACGGTC CATTGAAGGT AAACAACTAG CTGAGACCCA ACTCAGGATG GAATGGGTTC GGAGTTTGTT CTCAATCGAA ATAACAATGG CAGCATTGTT CATTCTTGCT GTCTATTTCC TTTACAAGAA AAAGAAGTCT GATCTGATCA AATGA
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Protein sequence | MLDEGDHAGA LNAFETAIMY QPNVPAAWYG KGDSHFYLGD YEAAIQAYDM ALQYDPNLLN AYAGKADSLA KIGKSDEART LYEKATAIGA DDAEIWSRKG STLYGLGYYS ESVNAYDKAI SLDPTNILSY VGKGYSLIGI AQYSDALEAF EEALVFDNGY SISWVGKGDC YYGLGGYEAA ISAYDMALSI DPTFSPAWSG KGYSLYEIGD HEGAIVAFDT ALFHSPKYVK ALSGKAFTLF ALEEYDLSLI AFNETIDADA SYAKAWSGKG DVLSQIGKAE QATASYRMSV QLYSGDADAL YNLGRELFEM GLFSEALEAF EASLNVNSEN LFALVGKGYA LYELGDYKGA SVAFDQAIAV QPGYERSIEG KQLAETQLRM EWVRSLFSIE ITMAALFILA VYFLYKKKKS DLIK
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