Gene Mbur_0225 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0225 
Symbol 
ID3997661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp202102 
End bp203346 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content42% 
IMG OID637958062 
ProductTPR repeat-containing protein 
Protein accessionYP_564985 
Protein GI91772293 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3063] Tfp pilus assembly protein PilF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGATG AAGGCGATCA TGCAGGGGCA TTGAATGCTT TTGAAACTGC TATTATGTAC 
CAGCCAAACG TTCCAGCTGC CTGGTATGGT AAAGGTGATT CTCATTTTTA TCTTGGTGAT
TATGAAGCCG CTATTCAGGC GTATGATATG GCGCTACAGT ACGATCCGAA TCTTTTGAAT
GCATATGCAG GCAAAGCTGA TTCATTAGCA AAGATCGGGA AGTCCGATGA AGCCAGGACT
CTTTATGAAA AAGCAACTGC TATCGGGGCT GATGATGCAG AAATATGGTC TCGTAAAGGC
AGTACTTTGT ATGGATTGGG ATATTATTCT GAATCGGTTA ATGCCTATGA TAAGGCCATT
TCCCTGGATC CAACTAACAT ATTATCGTAT GTTGGCAAAG GCTATTCACT AATTGGAATT
GCACAGTATT CCGATGCATT GGAGGCATTT GAAGAGGCTC TCGTATTTGA CAACGGGTAT
TCTATATCAT GGGTTGGAAA AGGTGATTGC TATTATGGTC TTGGTGGCTA TGAAGCTGCA
ATAAGTGCTT ATGATATGGC ATTATCAATA GATCCTACCT TTTCACCAGC ATGGTCCGGT
AAAGGCTATT CTCTATATGA AATAGGTGAT CATGAGGGTG CAATTGTTGC ATTCGATACT
GCTCTATTTC ACTCTCCTAA ATATGTAAAG GCATTAAGTG GAAAAGCTTT CACGCTTTTT
GCACTCGAGG AATACGATCT ATCTCTTATT GCTTTCAATG AAACGATCGA TGCTGATGCT
AGTTATGCAA AGGCATGGTC TGGTAAAGGT GATGTCCTTT CACAGATCGG GAAGGCAGAA
CAGGCAACTG CTTCATACAG AATGTCCGTC CAACTTTACT CCGGGGATGC TGATGCTCTC
TACAATCTTG GGCGTGAGCT TTTTGAAATG GGACTTTTTA GTGAAGCCCT TGAAGCGTTC
GAAGCTTCGT TGAACGTAAA CTCTGAGAAC TTATTTGCTC TTGTAGGTAA AGGTTATGCC
TTATATGAAT TAGGTGATTA TAAGGGTGCA TCTGTGGCCT TTGATCAAGC AATTGCTGTC
CAGCCAGGGT ATGAACGGTC CATTGAAGGT AAACAACTAG CTGAGACCCA ACTCAGGATG
GAATGGGTTC GGAGTTTGTT CTCAATCGAA ATAACAATGG CAGCATTGTT CATTCTTGCT
GTCTATTTCC TTTACAAGAA AAAGAAGTCT GATCTGATCA AATGA
 
Protein sequence
MLDEGDHAGA LNAFETAIMY QPNVPAAWYG KGDSHFYLGD YEAAIQAYDM ALQYDPNLLN 
AYAGKADSLA KIGKSDEART LYEKATAIGA DDAEIWSRKG STLYGLGYYS ESVNAYDKAI
SLDPTNILSY VGKGYSLIGI AQYSDALEAF EEALVFDNGY SISWVGKGDC YYGLGGYEAA
ISAYDMALSI DPTFSPAWSG KGYSLYEIGD HEGAIVAFDT ALFHSPKYVK ALSGKAFTLF
ALEEYDLSLI AFNETIDADA SYAKAWSGKG DVLSQIGKAE QATASYRMSV QLYSGDADAL
YNLGRELFEM GLFSEALEAF EASLNVNSEN LFALVGKGYA LYELGDYKGA SVAFDQAIAV
QPGYERSIEG KQLAETQLRM EWVRSLFSIE ITMAALFILA VYFLYKKKKS DLIK