| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0220 |
|---|
| Symbol | rps28e |
|---|
| ID | 3997656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 198505 |
|---|
| End bp | 198720 |
|---|
| Gene Length | 216 bp |
|---|
| Protein Length | 71 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637958057 |
|---|
| Product | 30S ribosomal protein S28e |
|---|
| Protein accession | YP_564980 |
|---|
| Protein GI | 91772288 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2053] Ribosomal protein S28E/S33 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000000000043121 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATG ATGATATGGG TTTTGCAGCT GAGGTTATCG ACGTGATCGG TAACACCGGT
ATGCATGGCG AAGCCAGCCA GATTCAGTGC AGGGTTCTTG AAGGTCGTGA CAAGGGTAGG
ATCATTACAA GAAACTGCGT TGGTCCTGTA AGAATTGGTG ATGTTTTCAT GCTTATGGAG
ACATCCAGAG AGGCTAAGAA ACTAACTACC AGGTGA
|
|---|
| Protein sequence | MADDDMGFAA EVIDVIGNTG MHGEASQIQC RVLEGRDKGR IITRNCVGPV RIGDVFMLME
TSREAKKLTT R
|
|---|
| |