| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0199 |
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| Symbol | |
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| ID | 3997166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcoides burtonii DSM 6242 |
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| Kingdom | Archaea |
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| Replicon accession | NC_007955 |
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| Strand | + |
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| Start bp | 181199 |
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| End bp | 182230 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637958036 |
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| Product | exosome complex exonuclease Rrp41 |
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| Protein accession | YP_564959 |
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| Protein GI | 91772267 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0689] RNase PH |
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| TIGRFAM ID | [TIGR02065] archaeal exosome-like complex exonuclease 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.000449737 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATA AACCGGTAAA ATTTATTGAC GAGAATGGAC TTCGTCTTGA CGGCAGGCGT
GTGGATGAGA TCCGCCCGAT GACCGTGGAA ATGGGCGTAC TCTCAAGAGC AGATGGCTCT
TGTTATCTTG AATGGGGCAA TAATAAGGTC CTTGCAGCTG TATATGGTCC AAGGGAACTT
CACCCACGCA GGCTTCAGCG TCCAAGTGAA GCACTTGTAA GGTATAGGTA TAATATGGCA
GCTTTCTCTG TGGAGGACCG TATCCGTCCT GGTCCAAGCA GGAGAAGTAC TGAGATATCA
AAGGTAAGCG GAGAGGCATT CGAAACCGTT GTTATGAAAC AGTTCTATCC TGGTGCTGTA
ATTGATGTAT TTGCAGAGGT CCTTCAGGCA GATGCAGGCA CAAGGACAGC GGCTATCAAT
GCTGCTACAC TTGCACTTGT TGATGCAGGC ATTCCTATGA AAGGATTAGT TGCTGCATGT
GCTGTTGGAA AGGTGGATGG TCAGCTTGTA ATCGATCTTA ATAAACCTGA AGACAATTAT
GGTGATGCTG ACCTGCCTAT TGCAATGACC GAGGATGGCG AGATAACTTT ACTTCAGATG
GATGGTAATC TTACTGCAGA TGAGATCGCG AAGGGTGTCG AGATGGTCCG AAAGGGCTGT
GAGCAGATAT TTGCCATTCA GAAGGAAGCT CTTTTATCAA AGTTTGGTAC TACTGACGAA
ATGGAGATTC TCGAGGAAGC TGAGCTTCAA GCAGAGGTCG AAAAATCCGG AATTGTAGAA
GATGTCGAAG CAGTTTCTGA CGCTGAGGAT GAAGAGCTCG AAGGCGAAGA AAATGAAGAA
CTTGAACTTC CGGATGAAGA AGAAGCTTTC ACGGATGACG GGGAAGAGGA TGCTTCTGAT
GAAGCTGAGG ACCTGTTCGG TGAAGATGTA TCTGAGTTCG AGATAACTGA AAACGCTGAG
TCCGAGGATA ACAGCTCTTC AGAAACAGAG GGCAATGAGT CCGATGAGGA TGAGGGTGAG
AAAAATGAGT GA
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| Protein sequence | MSDKPVKFID ENGLRLDGRR VDEIRPMTVE MGVLSRADGS CYLEWGNNKV LAAVYGPREL
HPRRLQRPSE ALVRYRYNMA AFSVEDRIRP GPSRRSTEIS KVSGEAFETV VMKQFYPGAV
IDVFAEVLQA DAGTRTAAIN AATLALVDAG IPMKGLVAAC AVGKVDGQLV IDLNKPEDNY
GDADLPIAMT EDGEITLLQM DGNLTADEIA KGVEMVRKGC EQIFAIQKEA LLSKFGTTDE
MEILEEAELQ AEVEKSGIVE DVEAVSDAED EELEGEENEE LELPDEEEAF TDDGEEDASD
EAEDLFGEDV SEFEITENAE SEDNSSSETE GNESDEDEGE KNE
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