Gene Mbur_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0187 
Symbol 
ID3997154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp171407 
End bp171955 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content42% 
IMG OID637958024 
Productputative RNA-binding protein 
Protein accessionYP_564947 
Protein GI91772255 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2016] Predicted RNA-binding protein (contains PUA domain) 
TIGRFAM ID[TIGR00451] uncharacterized domain 2 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.164095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAA CAATACGGGG CTATAATGCA TGGTTAAAAT CATGTTTTAT TATCAAAGGT 
GATAAGTTGA AAGTAAAGTC CAGGGTTCAA CTAAGGAAAT CTGCAAAGAA CAAATTGTTT
AAAAGTCTTC GATCTACTTT CGGGGATGTT ATTGATCGTA TTTCAGAATA CAAGCTTGAA
AGTGCTATGG CTGATGATTT TAAGATAATC ATCGTTGATG GCAAGGTGCT TTTCTTCCAG
ATGGGTGAGG TATCTTTCCC TACTGTAAGG GGTGTGCTGG AATTAGGACT TGATTGCAAT
GTCGTTACGG TTGATGCGGG TGCTGTGAAG TTTGTTGTGA ATGGTGCTGA TATAATGTGT
CCGGGAATCG TTAAAGTTGA TGATGGGCTG AATGAGGGCG ACCTTGTTAT CATCGTTGAA
GAAACACATG GTAAGCCTCT TGCTATCGGA CGTGCTCTTG TGCCGGCGAC TGAGATGGTG
GGCAGGTCAG GTAAGGCTAT TAAGTCTATA CATTATGTCG GGGATGAACT TTGGAACCTT
GAGGCATGA
 
Protein sequence
MFKTIRGYNA WLKSCFIIKG DKLKVKSRVQ LRKSAKNKLF KSLRSTFGDV IDRISEYKLE 
SAMADDFKII IVDGKVLFFQ MGEVSFPTVR GVLELGLDCN VVTVDAGAVK FVVNGADIMC
PGIVKVDDGL NEGDLVIIVE ETHGKPLAIG RALVPATEMV GRSGKAIKSI HYVGDELWNL
EA