| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mbur_0095 |
|---|
| Symbol | |
|---|
| ID | 3998864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcoides burtonii DSM 6242 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_007955 |
|---|
| Strand | + |
|---|
| Start bp | 83208 |
|---|
| End bp | 85439 |
|---|
| Gene Length | 2232 bp |
|---|
| Protein Length | 743 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637957936 |
|---|
| Product | DNA topoisomerase I |
|---|
| Protein accession | YP_564864 |
|---|
| Protein GI | 91772172 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0550] Topoisomerase IA |
|---|
| TIGRFAM ID | [TIGR01057] DNA topoisomerase I, archaeal |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000317173 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCATCTTA TCATAGCGGA AAAGCATATT GCAGCCAAAA GGATAGCAAA GATACTGGCC
CCGAAGGAAC CAAAACAGGT ACGTGTCAGT GGAATGGATA CGTTCGAATA TAAAAACCCT
GACGCAGAGG ACAGAATAAT CGTAATGGGA CTTAGCGGAC ATATCGTACA GCTCGATTTT
CCAAAAGCCT ATAACAACTG GCAGAAGATC GATGCAAATG AACTTATCGA TGCTGAGGTA
ATTACTACAC CTACCCATGT GAAGATAGTG GCAGCCCTCA GGAAACTAGG AAAGGAAGCT
ACGCATGTTA CCATTGCTAC TGACTACGAC CGTGAAGGAG AGCTTATTGG TGTCGAAGCA
CTGAACATTA TAAGGAAAGT GAACCCTGAT GTTGAGTTCG ATCGTGTTTT TTATAGTGCC
ATAACCAAGA CGGAGATAGA GGGAGCTTTT GCGAACCCTG CTTCAATTGA TTTCGATCTT
GCGGATGCAG GTCATTCCAG ACAGGTCATC GATCTTGTGT GGGGAGCTTC CCTTACAAGA
TACCTTTCTA TTTCAGCAGG CAGGCTGGGA AAGCTTTTCC TGTCAGTGGG AAGAGTGCAG
TCACCAACAC TTGCATTGAT AGTAGATAAG GAAAAGGAAA GGCAAGCATT TGTCTCGAAG
CCATACTGGG AAGTCAACGC GACCCTTAAG GATAACGATG ATGCACTGGT CAATGTACAG
CACAAGAACT CCAAGTTCTG GGAAAAGGAA GAAGCTGATG CTGTAATGGA AGTTATAGGA
GATAAGGCAT CCGTATCATC CGTGGATAGC TCGAAGAAGA CGGATAAGGT ACCAACTCCT
TTCAATACCA CAGAATTCAT CGGTGCTGCA AGTTCCATCG GTTTTACAGC ATCCAATGCC
ATGAGGATAG CAGAATCCCT TTACACCAAT GGTTTTATTT CATATCCAAG GACGGATAAT
ACCGTTTATC CTGCATCCAT CGACCTGAGG GCACAGATAG AGATATTCAG CAAAGGTCCT
TTTAGGGAAT ATGCCCAAAA GTTGCTTGCG AAAGATGAAC TTGTGCCTAC ACGTGGCAAA
AAAGAGACCA CGGACCACCC CCCTATCTAT CCTGCATCCC TTGCAAAGAA GAGTGAACTT
AATGAACAGG ATTGGAAGCT TTACGAGCTT GTGGTCAGAA GATTCTTCGC AACCTTTGCA
GATGAGGCCG AATGGGAGAC CATGAAGGTA AGGTTCGATA TCTCTGGTGA GGAATTCAAG
GCAAATGGTG CAAGACTTGT GCACCAGGGA TGGAGATGGT ATTACCCATA CAATGCTCCA
CAGGACAGGC TTCTTCCGGC ACTTTCTGAA GGAGATATAC TGGATGTGAC CGGCAAGGAA
ATGCTTGACA AGGAAACTCA GCCACCTGGA AGGTATGGAC AGGGACGTCT GATAAAGCTC
ATGGAAGACC TTGGTTTAGG TACAAAGGCC ACACGCCATG AGATCATCAG TAAGCTATAT
TCAAGGGCAT ACGTCCACGG AAATCCGCTT CAGCCTACCA AGACATCTTT TGCAGTTATC
GAGGCCCTTG AAAAGTATGC ACCGACCATT ACCAAGCATG ACATGACCAG TCAGCTTGAA
GAGGATATGG ATAGTATCGC TGAAGGGAAG GTTAAGGAAG ACAATGTTCT GAAAGAATCA
AGAACAATGC TGCATGAAGT ATTTACAGAG CTTGCCAATA ACAGCGAAAA TATCTCAGAA
TCCCTGCGTG CAGGCCTCCG CGAAGATAAA GTAATAGGAG AGTGTTCCGA ATGCGGTTCG
AAGCTCATGG TCAGAAGGTC GAAAAGAGGA TCCCGTTTTA TCGGTTGTAA TGGATATCCG
GATTGTAATT TTTCACTTCC ACTTCCAAAG AGCGGACAGA TCATCGTTAC TGAAAAAACA
TGTGAAGAAC ATGGAATTAA TCATGTGAAG ATAATCAATC CGGGAAAACG TCCATGGGAA
TTAGGATGTC CACAATGCAA TTTTATCGAA TGGAAGAAAA CTCAGGAAGA AGAAAAGGCC
AAGCAGCCAA AGGTGCCTAT TCCTGATAAG ATCACGGATG TTCCCGGTAT CGGAAAGGTC
ACTGCAGAAA AACTTAAGAA TGCAGAGATC AATACTATTG ATGAGTTAAG GCAAGCGAAT
GCAATTGAGC TTTCAAAGGC CACAAGCTTG CCTGCAGGCA AGATAATGAA ATGGCAGGAA
CTTGTTACAT AA
|
|---|
| Protein sequence | MHLIIAEKHI AAKRIAKILA PKEPKQVRVS GMDTFEYKNP DAEDRIIVMG LSGHIVQLDF
PKAYNNWQKI DANELIDAEV ITTPTHVKIV AALRKLGKEA THVTIATDYD REGELIGVEA
LNIIRKVNPD VEFDRVFYSA ITKTEIEGAF ANPASIDFDL ADAGHSRQVI DLVWGASLTR
YLSISAGRLG KLFLSVGRVQ SPTLALIVDK EKERQAFVSK PYWEVNATLK DNDDALVNVQ
HKNSKFWEKE EADAVMEVIG DKASVSSVDS SKKTDKVPTP FNTTEFIGAA SSIGFTASNA
MRIAESLYTN GFISYPRTDN TVYPASIDLR AQIEIFSKGP FREYAQKLLA KDELVPTRGK
KETTDHPPIY PASLAKKSEL NEQDWKLYEL VVRRFFATFA DEAEWETMKV RFDISGEEFK
ANGARLVHQG WRWYYPYNAP QDRLLPALSE GDILDVTGKE MLDKETQPPG RYGQGRLIKL
MEDLGLGTKA TRHEIISKLY SRAYVHGNPL QPTKTSFAVI EALEKYAPTI TKHDMTSQLE
EDMDSIAEGK VKEDNVLKES RTMLHEVFTE LANNSENISE SLRAGLREDK VIGECSECGS
KLMVRRSKRG SRFIGCNGYP DCNFSLPLPK SGQIIVTEKT CEEHGINHVK IINPGKRPWE
LGCPQCNFIE WKKTQEEEKA KQPKVPIPDK ITDVPGIGKV TAEKLKNAEI NTIDELRQAN
AIELSKATSL PAGKIMKWQE LVT
|
|---|
| |