Gene Mbur_0061 details

Gene Information

• Locus tag: Mbur_0061
• ID: 3997188
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 48323
• End bp: 50266
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637957905
• Product: ATP-dependent DNA helicase RecQ
• Protein accession: YP_564833
• Protein GI: 91772141
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0514] Superfamily II DNA helicase
• TIGRFAM ID: [TIGR00614] ATP-dependent DNA helicase, RecQ family; [TIGR01389] ATP-dependent DNA helicase RecQ

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACAGAA CACTCCAGAA ATATTTTGGT TATAGCGAAT TCCGTCCTCT CCAAGAGGAT 
ATTATCAATG ATGTTCTGAA TAAAAAGGAT GTTTTTGTAT TAATGCCGAC CGGCGGTGGC 
AAATCAATAT GCTACCAGAT ACCTGCACTC ATAATGGATG GGCTTGCCGT GGTGGTGTCT 
CCGCTCATTT CTCTGATGAA GGACCAGGTG GATGGACTTG TCAGCAATGG GATCTCGGCT 
GCTTACCTCA ATAGTACGTT GAGTTATAAC GAAGTTCAGA AAATTACTCG TGCCATTGTC 
GAAGGGAATG TGGATATATT GTATGTTGCA CCTGAACGTC TTTGCATGAA AAGCACTCAG 
GAGCTGCTAA GTCACGTCAA TGTAAGTCTT TTCGCTATCG ATGAAGCTCA TTGTATCTCT 
GAATGGGGAC ATGATTTCAG GCCGGAATAT CGGCGGATGG GATTTTTGAA AAAGAAGTAC 
CCTGATGTTC CTGTAATCGC ACTGACCGCA ACGGCTACTG CGAAGGTAAA GGAAAATACC 
ATCAAACAAC TTGATCTGGT CTCTCCTTCT GTCTATGTGG CAAGCTTTGA TCGTGCGAAC 
CTTTCCTATG AGATACGACC CAAGAACAAT ACCTATGGTG ACATGGTAAG TTACCTTAAG 
GGTCAGCGTG GAAATTCGGG TATTATCTAT TGCAACAGCC GAAAAAGTGT TGAATCTGTT 
TCCACCAAAC TGAATCGTGA AGGATTCCAT GCTCTCCCTT ATCATGCAGG ATTGAATGAT 
GCCAAAAGGC AGGATAATCA AGAACGTTTC ATCAGGGATG ATGTCGATAT CATTGTGGCT 
ACTGTTGCCT TTGGTATGGG CATTGATAAA CCGAACGTTC GTTTTGTTAT CCATTATGAC 
CTCCCCAAGA ACCTAGAGGG CTACTATCAG GAAACCGGCA GGGGTGGGCG TGATGGGCTT 
GAATGCGATT GCATCTTGTA TTTCAGTCGG GCTGACTGGT ACAAGATCAA ATATTTGATT 
GATCAGAAAC CCAAAAAGTC CGAGCGCGAT ATCGCAATGA CGAAGTTGCA GGAAATGATC 
GATTATTGTG AAAGCACTTC CTGTCGCAGG AAAGCCTTAT TACATTATTT TGGGGAAGAG 
CTGGAATCCG ATAATTGCGG AAGCTGTGAT GTCTGTTTGA ACCCACGTGA CACTTATGAT 
GCATCAGATG TCGCAAGGAC CTTCCTTTCC TGTGTCGATG AGGTCAATGA GCGGTTTGGC 
CTGACGCATA TAGTGGATAT CCTTACAGGC TCTAAGTCCA AGAAAATAAT AAGCTACAAA 
CATGACCGCC TTAAAAGCTA TGGCACTGGT GAAGGATACA TTAAGTCCGA ATGGGTGGAG 
ATGGCAAGGG AAATGATACG CTTGGGTCAT GTTGATGTGA AGGAAGGGAA ATACCCTATA 
TTACTTTTGA ACAAGAATAG CCGTGAGGTC CTTGGGGGGA GTGAGGTACA TCTGACACGT 
TCGATGGGAA CAACTGTTTC CAAACCACGG AAAGCACCTG CTACTGTGTC AAGGCCGGGC 
AATTCTGTAT CTTCCCGACC TGCATCTAGT GGTTCGAAAA AGGTTAGCTC AACGGTAGTC 
AGATCACCGG CTAAGTCTAC AAAGTACAGC AGCCAAAGAA GAACGTCTGT TCCGGGAAAG 
GCTAAGAGAG CTCCAACACC GATATCACGG CCGAACAAGA AACTCTTTGA CAAGCTTCGT 
GAATTGCGCA AAAGGCTTGC TGTGGAAGCG AATGTTCCTC CTTATATCAT ATTTGCAGAT 
ACCAGTCTCA GGCAGATGGC TGCAAACTTC CCTAATAATG AAAAAGAGTT TATTGGCATC 
ACGGGTGTCG GTGAGGTCAA GTTAAAGAAA TATGGTTCCG TTTTTATGAA AGAGATAGTT 
GCCTTTGAAA AAGGAAACAA GTAA 

 

Protein sequence

MHRTLQKYFG YSEFRPLQED IINDVLNKKD VFVLMPTGGG KSICYQIPAL IMDGLAVVVS 
PLISLMKDQV DGLVSNGISA AYLNSTLSYN EVQKITRAIV EGNVDILYVA PERLCMKSTQ 
ELLSHVNVSL FAIDEAHCIS EWGHDFRPEY RRMGFLKKKY PDVPVIALTA TATAKVKENT 
IKQLDLVSPS VYVASFDRAN LSYEIRPKNN TYGDMVSYLK GQRGNSGIIY CNSRKSVESV 
STKLNREGFH ALPYHAGLND AKRQDNQERF IRDDVDIIVA TVAFGMGIDK PNVRFVIHYD 
LPKNLEGYYQ ETGRGGRDGL ECDCILYFSR ADWYKIKYLI DQKPKKSERD IAMTKLQEMI 
DYCESTSCRR KALLHYFGEE LESDNCGSCD VCLNPRDTYD ASDVARTFLS CVDEVNERFG 
LTHIVDILTG SKSKKIISYK HDRLKSYGTG EGYIKSEWVE MAREMIRLGH VDVKEGKYPI 
LLLNKNSREV LGGSEVHLTR SMGTTVSKPR KAPATVSRPG NSVSSRPASS GSKKVSSTVV 
RSPAKSTKYS SQRRTSVPGK AKRAPTPISR PNKKLFDKLR ELRKRLAVEA NVPPYIIFAD 
TSLRQMAANF PNNEKEFIGI TGVGEVKLKK YGSVFMKEIV AFEKGNK