Gene Mbur_0022 details

Gene Information

• Locus tag: Mbur_0022
• Symbol: rpl30p
• ID: 3996922
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 11022
• End bp: 11483
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637957864
• Product: 50S ribosomal protein L30P
• Protein accession: YP_564796
• Protein GI: 91772104
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1841] Ribosomal protein L30/L7E
• TIGRFAM ID: [TIGR01309] 50S ribosomal protein L30P, archaeal

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.000000081539
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCGCAG TAGTTAGAGT TAGAGGCCCG GTAAATGTAA GCGGCAAGAT CGAGGATACC 
CTCGGCATGC TCCGTTTACA CAAGGTCAAC CATTGCGTCT TCCTTCAGGA TACCCCTAAC 
AATAAGGGTA TGATCCAGAA GTCAAAGGAC TACATCGCAT ACGGTACTGT CGATGTTGAA 
TCACTGACTG AGGTACTCAG CAAACGTGGA AGGTTGGAAG GCGATGCTCG TCTTACCGAT 
GAATATGTGA AGGAAAACTC CGAGTTTGCT TCCATTGCTT CCTTTGCAGA AGCTCTTGTT 
AATGATGATG CAAAGATCAC CGATGTCCCA CTGTTGAAAC CTGTTTTCAG GCTTCACCCT 
CCAAGGAAGG GACACGCTGG TATCAAAAGG ACTGCTCAAC AGGGCGGTGT CCTTGGAAAC 
CATGGCGATG ATATCAAGGC ACTTTTGAAC AAGATGAGGT GA 

 

Protein sequence

MFAVVRVRGP VNVSGKIEDT LGMLRLHKVN HCVFLQDTPN NKGMIQKSKD YIAYGTVDVE 
SLTEVLSKRG RLEGDARLTD EYVKENSEFA SIASFAEALV NDDAKITDVP LLKPVFRLHP 
PRKGHAGIKR TAQQGGVLGN HGDDIKALLN KMR