Gene Mbur_0021 details

Gene Information

• Locus tag: Mbur_0021
• Symbol: rps5p
• ID: 3996921
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcoides burtonii DSM 6242
• Kingdom: Archaea
• Replicon accession: NC_007955
• Strand: +
• Start bp: 10384
• End bp: 11019
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637957863
• Product: 30S ribosomal protein S5P
• Protein accession: YP_564795
• Protein GI: 91772103
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0098] Ribosomal protein S5
• TIGRFAM ID: [TIGR01020] ribosomal protein S5(archaeal type)/S2(eukaryote cytosolic type)

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00000032462
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCATATG AATATAATGA AGAATGGGTT CCACAGACAA GGCTCGGAAA GCTTGTCTTT 
GATGGACAGG TCACATCCAT GGATGAAGCT ATGGATTCCG GTCTGCCTAT AAGGGAATCA 
AAAATAGTAG ATCTATTATT ACCTGAACTT GAAGACGAAG TTCTCGACAT TAACATGGTT 
CAGAGAATGA CTGACTCCGG AAGGCGTGTC AAGTTCAGGG CTACTGTTAT CGTTGGAAAC 
GGAGACGGTT TCGTAGGACT TGGTCAGGCA AAAGATGTAC AGGTAGGACC TGCTATCAGA 
AAAGCTATTG ACAATGCAAA GATCAACATC ACACGTATCA AACGTGGATG CGGATCATGG 
GAATGTGGGT GTGGACTTCC ACACACCGTT CCTTCAGAGG TCAATGGTAA AGCAGGTAGT 
GTAACTGTGG TTCTCAAGCC TGCTCCTCGT GGGCTTGGTC TTGCTGCAGG AGGCACTGCA 
AGAAAGGTGC TTGAAAAAGC AGGCGTCAAA GATGTCTGGA CACGTACCGA AGGTCAGACC 
AGGACAACCC TCAACTTCGC AAAGGCAACA TACAATGCTT TGATGAACAC AGGCACTGTA 
AGGCGTCCAA TCGTTTTCGA TGAGACGGAG GCCTAA 

 

Protein sequence

MAYEYNEEWV PQTRLGKLVF DGQVTSMDEA MDSGLPIRES KIVDLLLPEL EDEVLDINMV 
QRMTDSGRRV KFRATVIVGN GDGFVGLGQA KDVQVGPAIR KAIDNAKINI TRIKRGCGSW 
ECGCGLPHTV PSEVNGKAGS VTVVLKPAPR GLGLAAGGTA RKVLEKAGVK DVWTRTEGQT 
RTTLNFAKAT YNALMNTGTV RRPIVFDETE A