Gene Mbur_0013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbur_0013 
Symbol 
ID3996913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcoides burtonii DSM 6242 
KingdomArchaea 
Replicon accessionNC_007955 
Strand
Start bp6551 
End bp7261 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content43% 
IMG OID637957855 
Product30S ribosomal protein S4e 
Protein accessionYP_564787 
Protein GI91772095 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1471] Ribosomal protein S4E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000026774 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCACTC ATCAAAAGAG GATATCTGTC CCAAAAAGCT GGCAGATCTC AAAGAAATCC 
AACAAATGGA TAACATCCAC AAGGCCTGGT CCTCACAACA GACTCCAGAG CATCCCATTA
GCAGTTATAC TCAGGGATAT GCTCGGTGTT GTCGATAACC GCGCAGAGGC AAAGAGAGTA
CTCTCTGAAG GCAATGTACT TGTTGACGGA GTAGCAAGGA AAGACCTTAG GTTCCCTGTA
GGTCTGATGG ATATTATTAC CATCCCATTG AACAACGTGG AATACCGCGT AATGCTCGAT
GGAAAGAGCA GACTTGTGTT GAACAAGCTT GATGGAACAG GTGCTGACAA ATTGTGCCGC
ATTGAAGGTA AGACCTCTAT CAAAGAAGGT AAGATCCAGA TGCGTCTTAA CGATGGTGTC
AATATCATTG GTTCCAACAA TTACAATACC AAGGATTCAA TAATCCTGTC CGTTCCAGAC
AAAAAGGTCG TCAAACACAT CAAATATGAA GTGGGCAATC TTGCAATGAT CGTTGGTGGA
AGCCATGCAG GCGAAGTTGG ATCTATCAAA GAGATCAATA CAGTGAAAAG TTCCAAGAAC
AACACAGTTA CTATCTCCGG TGAGATTGAA TTCGAGACCA TCGAAGATTA TGTGTTCGTG
ATCGGTGAAT CAAAACCAGA GATCTTCATA GGTGGTGAAA CTGTTGAGTA A
 
Protein sequence
MATHQKRISV PKSWQISKKS NKWITSTRPG PHNRLQSIPL AVILRDMLGV VDNRAEAKRV 
LSEGNVLVDG VARKDLRFPV GLMDIITIPL NNVEYRVMLD GKSRLVLNKL DGTGADKLCR
IEGKTSIKEG KIQMRLNDGV NIIGSNNYNT KDSIILSVPD KKVVKHIKYE VGNLAMIVGG
SHAGEVGSIK EINTVKSSKN NTVTISGEIE FETIEDYVFV IGESKPEIFI GGETVE