Gene Sden_R0001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_R0001 
Symbol 
ID4017903 
TyperRNA 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp42596 
End bp44130 
Gene Length1535 bp 
Protein Length 
Translation table 
GC content55% 
IMG OID640713850 
Product16S ribosomal RNA 
Protein accession 
Protein GI 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000556781 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGTTTGATCA TGGCTCAGAT TGAACGCTGG CGGCAGGCCT AACACATGCA AGTCGAGCGG 
CAGCGGGAAG GTAGTTTACT ACCTTTGCCG GCGAGCGGCG GACGGGTGAG TAATGCCTAG
GGATCTGCCC AGTCGTGGGG GATAACAGTT GGAAACGACT GCTAATACCG CATACGCCCT
ACGGGGGAAA GGAGGGGACC TTCGGGCCTT TCGCGATTGG ATGAACCTAG GTGGGATTAG
CTAGTTGGTG AGGTAATGGC TCACCAAGGC GACGATCCCT AGCTGGTCTG AGAGGATGAT
CAGCCACACT GGAACTGAGA CACGGTCCAG ACTCCTACGG GAGGCAGCAG TGGGGAATAT
TGCACAATGG GGGAAACCCT GATGCAGCCA TGCCGCGTGT GTGAAGAAGG CCTTCGGGTT
GTAAAGCACT TTCAGTCAGG AGGAAAGGTA GCGTGTTAAT AGCACGTTAC TGTGACGTTA
CTGACAGAAG AAGGACCGGC TAACTCCGTG CCAGCAGCCG CGGTAATACG GAGGGTCCGA
GCGTTAATCG GAATTACTGG GCGTAAAGCG TGCGCAGGCG GTTTGTTAAG CCAGATGTGA
AAGCCCCGGG CTCAACCTGG GAATTGCATT TGGAACTGGC GAACTAGAGT CTTGTAGAGG
GAGGTAGAAT TTCAGGTGTA GCGGTGAAAT GCGTAGATAT CTGAAGGAAT ACCGGTGGCG
AAGGCGGCCT CCTGGACAAA GACTGACGCT CATGCACGAA AGCGTGGGGA GCAAACAGGA
TTAGATACCC TGGTAGTCCA CGCCGTAAAC GATGTCTACT CGGAGTTTGG TGCCTTGAGC
ACTGGGCTCC CAAGCTAACG CATTAAGTAG ACCGCCTGGG GAGTACGGCC GCAAGGTTAA
AACTCAAATG AATTGACGGG GGCCCGCACA AGCGGTGGAG CATGTGGTTT AATTCGATGC
AACGCGAAGA ACCTTACCTA CTCTTGACAT CCACAGAAGC CAGCAGAGAT GCAGGTGTGC
CTTCGGGAAC TGTGAGACAG GTGCTGCATG GCTGTCGTCA GCTCGTGTTG TGAAATGTTG
GGTTAAGTCC CGCAACGAGC GCAACCCCTA TCCTTATTTG CCAGCACGTA ATGGTGGGAA
CTCTAGGGAG ACTGCCGGTG ATAAACCGGA GGAAGGTGGG GACGACGTCA AGTCATCATG
GCCCTTACGA GTAGGGCTAC ACACGTGCTA CAATGGCGAG TACAGAGGGT TGCAAAGCCG
CGAGGTGGAG CTAATCTCAC AAAGCTCGTC GTAGTCCGGA TCGGAGTCTG CAACTCGACT
CCGTGAAGTC GGAATCGCTA GTAATCGTGA ATCAGAATGT CACGGTGAAT ACGTTCCCGG
GCCTTGTACA CACCGCCCGT CACACCATGG GAGTGGGCTG CAAAAGAAGT GGGTAGTCTA
ACCTTCGGGA GGACGCTCAC CACTTTGTGG TTCATGACTG GGGTGAAGTC GTAACAAGGT
AGCCCTAGGG GAACCTGGGG CTGGATCACC TCCTT
 
Protein sequence